TCONS_00062479-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062479-protein
Unique NameTCONS_00062479-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062479-protein ID=TCONS_00062479-protein|Name=TCONS_00062479-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MDIDEPAALFEDLTPNKDGGVTKTITKQGTGNATPYKGAKVHVHYTGRLL
DGTVFDSSRGKPGFFSFQVGVGQVIKGWDLVIPTMKRNEICEIKVAPQYA
YGEEGFPPTIPGNATLIFQIQLFGWEDEKITKDGGITKHIVKEGDGVIKP
NLDSIVKVHLRGSYQGRVFDERDVEFILGDGYEKEIIDGVEKALLKMKRH
ERAIIQIKPQYGFRDEGHEEFNVPPNAEIEYEIVLYSFEKALEIYEMDYD
QKLERSQSLKDRALPHFKIGRYNQAIEFYERIITFLKTNKLDNDYQRSLP
MTISAISNIALCHLKMKDFLNVVTNCQKVLELDDKNVKATFRMAEAYAGC
HDFSQAVIYFEKTLDLEPSNSSAKKQLLNARAMQKKSIEKEKKLYSNIFA
KMSDN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039145XLOC_039145Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062479TCONS_00062479Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR001179PPIase_FKBP_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availableGENE3D3.10.50.40coord: 5..128
e-value: 6.6E-40
score: 135.9
NoneNo IPR availableGENE3D3.10.50.40coord: 129..246
e-value: 1.7E-23
score: 82.5
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 130..241
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 17..129
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 303..336
e-value: 0.03
score: 23.5
coord: 256..289
e-value: 1.5
score: 17.8
coord: 337..370
e-value: 0.0058
score: 25.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 256..289
score: 8.024
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 337..370
score: 10.679
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 303..336
score: 6.225
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 247..397
e-value: 3.3E-27
score: 94.4
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 243..402
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 34..122
e-value: 2.8E-27
score: 94.8
coord: 150..235
e-value: 2.5E-14
score: 53.3
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 153..239
score: 18.519
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 38..126
score: 26.257
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 256..370
score: 16.402

Blast
[Close]
BLAST of TCONS_00062479-protein vs. Swiss-Prot (Human)
Match: FKBP4 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 350.132 bits (897), Expect = 1.036e-117
Identity = 169/397 (42.57%), Postives = 265/397 (66.75%), Query Frame = 0 
Query:   12 DLTPNKDGGVTKTITKQGTGNATPYKGAKVHVHYTGRLLDGTVFDSSRGKPGFFSFQVGVGQVIKGWDLVIPTMKRNEICEIKVAPQYAYGEEGFPPTIPGNATLIFQIQLFGWEDEKITK--DGGITKHIVKEGDGVIKPNLDSIVKVHLRGSYQGRVFDERDVEFILGDGYEKEIIDGVEKALLKMKRHERAIIQIKPQYGFRDEGHEEFNVPPNAEIEYEIVLYSFEKALEIYEMDYDQKLERSQSLKDRALPHFKIGRYNQAIEFYERIITFL--KTNKLDNDYQRSLPMTISAISNIALCHLKMKDFLNVVTNCQKVLELDDKNVKATFRMAEAYAGCHDFSQAVIYFEKTLDLEPSNSSAKKQLLNARAMQKKSIEKEKKLYSNIFAKMSD 404
            D++P +D GV K I ++GTG   P  G +V VHYTG LLDGT FDSS  +   FSF +G G+VIK WD+ I TMK  E+C I   P+YAYG  G PP IP NATL+F+++LF ++ E +T+  DGGI + I   G+G  KPN  +IV+V L G Y+ ++FD+R++ F +G+G   ++  G+E+A+ +M++ E +I+ +KP Y F   G E+F +PPNAE++YE+ L SFEKA E +EM+ ++KLE+S  +K+R   +FK G+Y QA+  Y++I+++L  +++  + + Q++  + +++  N+A+CHLK++ F   + +C K LELD  N K  FR  EA+   +DF  A   F+K L L P+N +AK QL   +   ++ + +EKKLY+N+F ++++
Sbjct:   24 DISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE 420
The following BLAST results are available for this feature:
BLAST of TCONS_00062479-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FKBP41.036e-11742.57Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo ... [more]
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