TCONS_00062214-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062214-protein
Unique NameTCONS_00062214-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062214-protein ID=TCONS_00062214-protein|Name=TCONS_00062214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MRNVFRLLSTIATKEVIFTRTNLTRQNFHQYHQILFLNNVRHLSVAEPRN
LAKPMIKMTQVATPSDYQQPTINPNNGTDNTTTTNTKDSKIYIHTGNIAN
WTNVKSRRSNEMPTNELYQSLCRTITKHGSQQLGGWNEEEIRINCTNTEK
IDSVERGLLKVTAKIFLQKLDTKSMVNSVNSTLKQLGLHSIDSLYLALPP
FAENQPFAETILPLWEEMERFRDAGLATQISTCDLDHEKLKTLVEMVKIR
PEVNQVNLTSCCHMPEDLVQYAKEIGIVLHTHGDQAVMLPDENVEALINV
LKPDDDRTFSTDWIVRYAVVVKCRGVIKSKGYIAAIDALTNTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039002XLOC_039002Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062214TCONS_00062214Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023210NADP_OxRdtase_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023210NADP-dependent oxidoreductase domainPFAMPF00248Aldo_ket_redcoord: 166..279
e-value: 2.7E-8
score: 33.2
IPR023210NADP-dependent oxidoreductase domainGENE3D3.20.20.100coord: 114..286
e-value: 5.2E-19
score: 67.9
IPR023210NADP-dependent oxidoreductase domainSUPERFAMILY51430NAD(P)-linked oxidoreductasecoord: 152..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..86

Blast
[Close]
BLAST of TCONS_00062214-protein vs. Swiss-Prot (Human)
Match: GSH0 (Glutamate--cysteine ligase regulatory subunit OS=Homo sapiens GN=GCLM PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.883e-37
Identity = 84/254 (33.07%), Postives = 139/254 (54.72%), Query Frame = 0 
Query:   91 IYIHTGNIANWTNVKSRRSNEMPTNELYQSLCRTITKHGSQQLGGWNEEEIR-----INCT---NTEKIDSVERGLLKVTAKIFL-QKLDTKSMVNSVNSTLKQLGLHSIDSLYLALPPFAENQPFA-ETILPLWEEMERFRDAGLATQISTCDLDHEKLKTLVEMVKIRPEVNQVNLTSCCHMPEDLVQYAKEIGIVLHTHGDQAVMLPDENVEALINVLKPD-DDRTFSTDWIVRYAVVVKCRGVIKSKGYI 333
            +++ TGN+ NW  ++ ++     + EL+  + +T+ +  SQ     N + +R     + CT     EKI+  ER  +KV+AK+F+ +   + S  ++V+     LG+  +DS+ +A PP  +    + E + P WEE+E    +     I T DLD  +L+ L +  +++P  NQVNL SCC MP DL  +AK+  I L TH D   +L + + +  +    PD     +   W++RY+V+VK RG+IKSKGYI
Sbjct:   18 LHLQTGNLLNWGRLR-KKCPSTHSEELHDCIQKTLNEWSSQI----NPDLVREFPDVLECTVSHAVEKINPDEREEMKVSAKLFIVESNSSSSTRSAVDMACSVLGVAQLDSVIIASPPIEDGVNLSLEHLQPYWEELENLVQSKKIVAIGTSDLDKTQLEQLYQWAQVKPNSNQVNLASCCVMPPDLTAFAKQFDIQLLTHNDPKELLSEASFQEALQESIPDIQAHEWVPLWLLRYSVIVKSRGIIKSKGYI 266
The following BLAST results are available for this feature:
BLAST of TCONS_00062214-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSH01.883e-3733.07Glutamate--cysteine ligase regulatory subunit OS=H... [more]
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