TCONS_00062090-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062090-protein
Unique NameTCONS_00062090-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length309

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062090-protein ID=TCONS_00062090-protein|Name=TCONS_00062090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
RKACKSAFNNFVKNCVSPDGVNNPKKLFRFIKSPKYENDGVAPLRDNGSL
HIDNTKKANIRNKQFSNVFSIPDGRIPPLQGQANTPMPEINITEPGVRKL
LNDINPNKAAGPDGVSSRFLNEFADQISPGLTLVMQASLKQSSIPDDWRH
ALVAPVFKPGKTNKSKACNYRPISLTSISCKILEHILHSNIMAHLDNTNI
LTDSQHGFRKHRSGESQLVTTIQDLAKSLNEAKQIDSILLDFSKAFDKVD
HKKLCLKLHHYGVMGKLLNGSPTTSPIALKLLSLMASHLKKLMLSLEFLK
AQSSALFCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038913XLOC_038913Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062090TCONS_00062090Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 187..305
e-value: 4.9E-4
score: 19.3
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 150..277
e-value: 1.75291E-29
score: 111.614
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 99..259
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 167..267
e-value: 1.3E-15
score: 57.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062090-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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