TCONS_00062054-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062054-protein
Unique NameTCONS_00062054-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062054-protein ID=TCONS_00062054-protein|Name=TCONS_00062054-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
NRGGKNGRLTSQVKTWLKTRSFECLSLKVMPGSNCCIVGCGSSRRIKGIG
IFKLPKATNEVNKQWRDDILGIILRTRQLDADFKNQLDNDNISICEKHFK
PEDLEKFPPIKEGGSERKKLITGCIPTINLPQRTHDKENFAVKRKPPIER
TLIPPKKRSHEYETFTELCK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038889XLOC_038889Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062054TCONS_00062054Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006612Zinc finger, C2CH-typeSMARTSM00980THAP_2coord: 33..135
e-value: 2.8E-4
score: 30.2
IPR006612Zinc finger, C2CH-typeSMARTSM00692dm3coord: 51..134
e-value: 0.0057
score: 23.9
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 35..129
e-value: 4.3E-10
score: 40.3
IPR006612Zinc finger, C2CH-typePROSITEPS50950ZF_THAPcoord: 30..129
score: 15.144
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 34..132

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062054-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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