TCONS_00062052-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062052-protein
Unique Name	TCONS_00062052-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	481

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062052-protein ID=TCONS_00062052-protein|Name=TCONS_00062052-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
MWCDNRLLLFGVLLLTFLVQAHITAAANSKEDEFAEFDRDPDAQEEEDDT
EADVEEVEQNSVNNDDFNDENEFDKGGKEEKSEDQQEHEEQDEFDPFTDE
EEFEGYNKDRMPKAKVPAGGPGLKITKVPVHLRAGWQAFYLELVTLAGIL
VYAANFFTGKSKNSKLATAWFKAHKPLLEQHFSIVGDDGMSKEPQSGVLV
KESESVYTLWCTGRQYCEGMLVELRLLKRHDLVSVMAQMMRPKSELIKVT
VYMDDEDMDNFVFALLPKKQAAKYQKELQDLSYFCGDKKSAERFNLENHS
VLSESGEVTDFILSQQVCNIIKKNEECFESLHFSDQFVGPKKDETEETEG
SNKLKKPKKVLLFEFKIPGNGRTKVASMGATEQLVKMVLFFIDRVKSLRL
GQQARSKSDKKRREVEQSFSKQSHAQRQEAAQMRREEKIRAEKERLMAEE
DPEKQRKMEEQMTKRDAKKRNPKVKSLKVRM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038887	XLOC_038887	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062052	TCONS_00062052	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012879	DUF1682

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012879	Protein of unknown function DUF1682	PFAM	PF07946	DUF1682	coord: 139..469 e-value: 1.8E-93 score: 313.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..481

Blast

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BLAST of TCONS_00062052-protein vs. Swiss-Prot (Human)
Match: CCD47 (Coiled-coil domain-containing protein 47 OS=Homo sapiens GN=CCDC47 PE=1 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 2.539e-126
Identity = 209/468 (44.66%), Postives = 295/468 (63.03%), Query Frame = 0

Query:   10 FGVLLLTFLVQAHITAAANSKEDEFAEFDRDPDAQEEEDDTEADVEEVEQNSVNNDDFNDENEFDKGGKEEKSE----DQQEHEEQDEFDPFTDEEEFEGYNKDRMPKAKVPAGGPGLKITKVPVHLRAGWQAFYLELVTLAGILVYAANFFTGKSKNSKLATAWFKAHKPLLEQHFSIVGDDGMSKEPQS-GVLVKESESVYTLWCTGRQYCEGMLVELRLLKRHDLVSVMAQMMRPKSELIKVTVYMDDEDMDNFVFALLPKKQAAKYQKELQDLSYFCGDK-KSAERFNL-ENHSVLSESGEVTDFILSQQVCNIIKKNEECFESLHFSDQFVGPKKDETEETEGSN-KLKKPKKVLLFEFKIPGNGRTKVASMGATEQLVKMVLFFIDRVKSLRLGQQARSKSDKKRREVEQSFSKQSHAQRQEAAQMRREEKIRAEKERLMAEEDPEKQRKMEEQMTKRDAKK 469
            F V+LL F   +         E++  E+D D D  E ED  E  V E  Q  +  +D  DE   +  G++E  E    D    E   E +P+ D+EEFEGY +D+ P          + I  VP HL+  W+++YLE++ + G+L Y  N+  GK+KNS+LA AWF  H+ LLE +F++VGDDG +KE  S G L +E+E +Y LWC+GR  CEGML++LR LKR DL++V+A+MMRP S+ +++ V M+DEDMD +VFA+  +K   + QKE+QDLS FC DK KS  ++ L ++ ++LSE GEVTD ++  ++ + +    +  ES+HFSDQF GPK     + EG   KL   K+ LLF F +PG+G T    M A   L+ MV++ ID+ K  RL ++ + K+DK R  VE++F K +H QRQEAAQ RREEK RAEKER+M EEDPEKQR++EE   +R+ KK
Sbjct:    7 FCVVLLVFGSVSEAKFDDFEDEEDIVEYD-DNDFAEFEDVMEDSVTESPQRVIITEDDEDETTVELEGQDENQEGDFEDADTQEGDTESEPY-DDEEFEGY-EDK-PDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLESNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTDGMMDTKMVHFLTHYADKIESVHFSDQFSGPK---IMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKK 467

The following BLAST results are available for this feature:

BLAST of TCONS_00062052-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062052-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CCD47	2.539e-126	44.66	Coiled-coil domain-containing protein 47 OS=Homo s...	[more]

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TCONS_00062052-protein (polypeptide) - C. hemisphaerica