TCONS_00061855-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061855-protein
Unique NameTCONS_00061855-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061855-protein ID=TCONS_00061855-protein|Name=TCONS_00061855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MQTILLLLVGLITISHGFPSKAHNQKKERLHYPGYHIKGPQKDHKEISYD
EPMPEEDAQYDEEMYHDGPSYDGPVPEGAPQYDEEMYQDGLSCKDKYSNC
PTSLRQYCESHSFVKTDWCRKTCGDCSPDPAPAYVTAEPKISSSEMESIK
ATCLAAHNAKRALHRDTSSMTYDMDLAKRAQTYAEYLLEFKQWKHDDFRT
YNGYETGVGENLYWSSSASGASTNAVTSWYDEIKNYNYETGKSNGGDIGH
FTQLVWDSSTKLGCGVAKGTGGTYVVSRYLPAGNTQDQYTQHVHELIAKK
DQQDDAVEEKVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038800XLOC_038800Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061855TCONS_00061855Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR003582ShKT_dom
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 170..188
score: 31.91
coord: 225..238
score: 40.53
coord: 248..264
score: 53.68
coord: 274..287
score: 38.27
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 223..238
score: 37.11
coord: 170..188
score: 29.61
coord: 247..266
score: 46.88
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 92..127
e-value: 3.8E-5
score: 33.1
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 93..126
score: 10.272
IPR014044CAP domainSMARTSM00198SCP_3coord: 148..287
e-value: 4.6E-33
score: 125.8
IPR014044CAP domainGENE3D3.40.33.10coord: 141..298
e-value: 6.2E-38
score: 129.8
IPR014044CAP domainPFAMPF00188CAPcoord: 154..276
e-value: 1.0E-19
score: 71.5
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 148..292
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 249..259
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 153..284
e-value: 2.11145E-44
score: 148.897

Blast
[Close]
BLAST of TCONS_00061855-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 2.705e-16
Identity = 48/137 (35.04%), Postives = 67/137 (48.91%), Query Frame = 0 
Query:  153 CLAAHNAKRALHRDTSSMTYDMDLAKRAQTYAEYLLEFKQWKHDDFRTYNGYETGVGENLYWSSSASGASTNAVTSWYDEIKNYNYETGKSNGGDIGHFTQLVWDSSTKLGCGVAKGT-GGTYVVSRYLPAGNTQDQ 288
             L AHN  R  H     +    +L + AQ Y+E L   +  KH    +        GENL W+S            WY EIKNYN++      G  GHFT +VW ++ K+G G A  + G ++VV+RY PAGN  ++
Sbjct:   13 VLKAHNEYRQKH-GVPPLKLCKNLNREAQQYSEALASTRILKHSPESS----RGQCGENLAWASYDQ-TGKEVADRWYSEIKNYNFQQPGFTSG-TGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNE 142
The following BLAST results are available for this feature:
BLAST of TCONS_00061855-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR12.705e-1635.04Golgi-associated plant pathogenesis-related protei... [more]
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