TCONS_00061614-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061614-protein
Unique NameTCONS_00061614-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length236

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061614-protein ID=TCONS_00061614-protein|Name=TCONS_00061614-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
MNGKKVNAVLPAAGIGTRFGAQKPKQFTEVDGKPIICYTIEAFQSIPWIE
KVVVVISEDWMEFTQEIIDINKYDKVKLVIGKDTRHRSINVGVNSIESSA
DDIVIVHDAVRPFLKEDFLKQLVEQAIINKAAGAVRALVSTVVKCDVDGF
MESSLVRSQYRESHTPQAFQFEVLENAYKQCSQEDFNHGTECLDLVQKYC
GVRPKLVDGPEYLWKVTHQKDIILMESFLQREKEHR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038647XLOC_038647Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061614TCONS_00061614Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR034683IspD/TarI
IPR018294ISPD_synthase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0070567cytidylyltransferase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0070567 cytidylyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..236
e-value: 8.5E-39
score: 133.0
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 6..230
IPR034683Cytidylyltransferase IspD/TarIPFAMPF01128IspDcoord: 6..230
e-value: 1.3E-46
score: 159.0
IPR034683Cytidylyltransferase IspD/TarICDDcd02516CDP-ME_synthetasecoord: 8..224
e-value: 5.05619E-72
score: 220.473
IPR0182944-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved sitePROSITEPS01295ISPDcoord: 104..111

Blast
[Close]
BLAST of TCONS_00061614-protein vs. Swiss-Prot (Human)
Match: ISPD (D-ribitol-5-phosphate cytidylyltransferase OS=Homo sapiens GN=ISPD PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 8.357e-62
Identity = 101/234 (43.16%), Postives = 147/234 (62.82%), Query Frame = 0 
Query:    4 KKVNAVLPAAGIGTRFGAQKPKQFTEVDGKPIICYTIEAFQSIPWIEKVVVVISEDWMEFTQEIIDINKYDKVKLVIGKDTRHRSINVGVNSIES-------SADDIVIVHDAVRPFLKEDFLKQLVEQAIINKAAGAVRALVSTVVKCDVDGFMESSLVRSQYRESHTPQAFQFEVLENAYKQCSQEDFNHGTECLDLVQKYCGVRPKLVDGPEYLWKVTHQKDIILMESFLQ 230
            + V AVLPA G G R G   PKQF  +  +P+I YT++A + + WI+ +VV ++ + ME  + II   ++ ++ LV    TRHRSI  G+ ++         S  ++VI+HDAVRPF++E  L ++V  A  + AAGA+R LVSTVV    DG ++ SL R+++R S  PQAF F+V+  AY+QCS  D   GTECL L  KYC  + KLV+G   LWKVT+++D+   ES ++
Sbjct:   45 QAVAAVLPAGGCGERMGVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIK 278
The following BLAST results are available for this feature:
BLAST of TCONS_00061614-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ISPD8.357e-6243.16D-ribitol-5-phosphate cytidylyltransferase OS=Homo... [more]
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