TCONS_00061435-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061435-protein
Unique Name	TCONS_00061435-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	413

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061435-protein ID=TCONS_00061435-protein|Name=TCONS_00061435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=413bp
MYSGSSLVDLKAELSRKEEEFGKLRTGDEKSKRGSSNKTFQKIHTITKSK
KTKKNKVGDWKDSDDEKETEESSKGKQMSDEMKEMYAKSQQKMLAKAKIY
EKMQKGEMEDIQDFKGETRYLVDFEQKYIDSDDIPTSTSGSQDNINRSLP
RNDNADGVSSSQADFEKEEARRQRVSEDIYAADIDYVDQLHEKWRQWQDD
LLDGPVHYENVKFDEIRNLGTSYFAFSRDEEERKRQIEDFRKMREETKSV
IKKKEALQNKRKAALDARLEKVKRRKAEDEGRLDEYLKELAAKEQAEKEI
AEAKEVSEKTEDEGDVETTKDATDYFIKQLRKQSTKKRDWDQGKHDNFVG
QAFVKSGVQQRTGLSANADRPSSTGSGSATMTSQTTKKEPSYEKKIENIR
KERPEEFAPPSFY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038541	XLOC_038541	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061435	TCONS_00061435	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025066	DUF4078

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 240..260
None	No IPR available	COILS	Coil	Coil	coord: 262..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..413
IPR025066	Protein of unknown function DUF4078	PFAM	PF13300	DUF4078	coord: 192..275 e-value: 8.0E-20 score: 70.9

Blast

[Close]

BLAST of TCONS_00061435-protein vs. Swiss-Prot (Human)
Match: CC174 (Coiled-coil domain-containing protein 174 OS=Homo sapiens GN=CCDC174 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 3.618e-26
Identity = 115/402 (28.61%), Postives = 181/402 (45.02%), Query Frame = 0

Query:    3 SGSSLVDLKAELSRKEEEFGKLRTGDEKSKRGSSNKTFQKIHTITKSKKTKKNKVGDWKDSDDEKETEESSKGKQMSDEMKEMYAKSQQKMLAKAKIYEKMQKGEMEDIQDFKGETRYLVDFEQKYIDSDDIPTSTSGSQDNINRSLPRNDNADGVSSSQADFEKEEARRQRVSEDIYAADIDYVDQLHEKWRQWQDDLLD------------------------------------------------GPVHYENVKFDEIRNLGTSYFAFSRDEEERKRQIEDFRKMREETKSVIKKKEALQNKRKAALDARLEKVKRRK--------AEDEGRLDEYLKELAAKEQAEKEIAEAKEVSEKTEDEGDVETTKDATDYFIKQLRKQSTKKRDWDQGKHDNF 348
            + SSLVDLKAEL RK+EEF + +   +    G    T +K    +K      N+     + D E++ EE           ++   K+++K+  KAK+YEKM KG   D  D + E  YLVDF QK ID        SG+  +  ++  R+D+ + +       E E    Q  SE+     +DYVD L    R  + DL D                                                GPVHYE+++ +E R LG  YFAF+RD+E R +Q++    +RE+T     K+E ++ KRKA L+ARL K++++K         E+E R  + +  L  + +A   +   +  ++ ++ E  V+  KD T   +  +       R+WD+GK  +F
Sbjct:   11 TASSLVDLKAELFRKQEEFKQEKLLKDSGVFGKPKTTNKKPSIWSKQNVGVSNRA----EKDAEQKIEE-----------QKTLDKAREKLEEKAKLYEKMTKG---DFIDEEVEDMYLVDFTQKIIDKRKE-MEASGAHRDSQKAGERDDDEENLP------EGEIPPPQDPSEEW----VDYVDSLGRSRRCMRKDLPDLLEMDKNLQGRLFISPANEKTLLSEDMRKELQRQQWEEEEREALKRPMGPVHYEDIRENEARQLGVGYFAFARDKELRNKQMKTLEMLREQTTDQRTKRENIKEKRKAILEARLAKLRQKKMKKSKEGGTEEENRDGDVIGPLPPEPEA---VPTPRPAAQSSKVEVIVQERKD-TKPGVPHI-------REWDRGKEFSF 372

The following BLAST results are available for this feature:

BLAST of TCONS_00061435-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061435-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CC174	3.618e-26	28.61	Coiled-coil domain-containing protein 174 OS=Homo ...	[more]

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TCONS_00061435-protein (polypeptide) - C. hemisphaerica