TCONS_00061379-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061379-protein
Unique Name	TCONS_00061379-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	504

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061379-protein ID=TCONS_00061379-protein|Name=TCONS_00061379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
MIYSSFIESILAHPMTEQVCFFLVPAISPKLSLQTLSKVLVTMDEEKIQS
VWMLYSLLSIIEQNQDNAMDFETTLNCTKALRIMIDQLRPRKDKERTGQV
ETSDSSDESSDEDESELMELGETEPIPESHCQRYVSHKCVELMSEKFLIS
PCLTLLSKGLQKNKSLRSQLLIDICHISHHMLYTLNTPVQKSEFLYSLAF
SKYFLRLTWYELLALETYTNTGKTVQLLHQLAHGNAMTSQDEQRVIPMLS
VYTTLLRYAMFSIYDTDFYSDNTKSTLMPFRITEVIEMSRILRDVVLGLI
VFMYPDIKMITTSAQQKQWHTLCRSVTLLVKQLYARDSRRRFCPEHHWLS
NRAAISHETMKINFFVDNDDDEMDVESDFSKDHLFKPGLSTLNARNVAIL
EYVPFAVPFLQRVLIFQRIIQEDKKNNQTPEQAFISGGGVESLTINRKYL
YQDAFDQLSKERRADIKQVVRVQMINAQGLDEAGIDGGGVFREFMSQFIK
EAYD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038514	XLOC_038514	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061379	TCONS_00061379	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000569	HECT_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004842	ubiquitin-protein transferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1750.10		coord: 407..504 e-value: 7.7E-14 score: 51.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..122
IPR000569	HECT domain	PROSITE	PS50237	HECT	coord: 462..504 score: 12.127
IPR000569	HECT domain	SUPERFAMILY	56204	Hect, E3 ligase catalytic domain	coord: 441..503

Blast

[Close]

BLAST of TCONS_00061379-protein vs. Swiss-Prot (Human)
Match: UBE3C (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3)

HSP 1 Score: 250.751 bits (639), Expect = 3.927e-73
Identity = 171/557 (30.70%), Postives = 280/557 (50.27%), Query Frame = 0

Query:    2 IYSSFIESILAHPMTEQVCFFLVPAISPKLS-------LQTLSKVLVTMDEEKIQSVWMLYSLLSIIEQNQDNAMDFETTLNCTKALRIMIDQLRPRKDKERTGQVETSDSSDESSDEDESELMELGETEPIPESH--CQRYVSHKCVELMSEKFLISPCLTLLSKGLQKNKSLRSQLLIDICH---ISHHMLYTLNTPVQKSEFLYSLAFSKYFLRLTWYELLALETYTNTGKTVQLLHQLAHGNAMTSQDEQRVIPMLSVYTTLLRYAMFSIYDTDFYSD------NTKSTLMPFRITEVIEMSRILRDVVLGLIVFMYPDIK--------------MITTSA--------QQKQWHTLCRSVTLLVKQLYARDSRRRFCPEHHWLSNRAAISHETMKINFF--------------VDNDDDEMDVESDFSKDHLFKPGLSTLNARNVAILEYVPFAVPFLQRVLIFQRIIQEDKKNNQTPEQAFISGGGVESLTINRKYLYQDAFDQLSKERRADIKQVVRVQMINAQGLDEAGIDGGGVFREFMSQFIKEAYD 504
            ++++F E  LA P T+Q+  F++PA++   +       L  L  +      +   + W+ Y +L++ E N   A+  E  L   + L+  + QL           V  + +S   S  D  E  E  +    PE       Y++ +C++ +  K   +  L L+ +     +   +  +  +CH   + H M+      V K   LYSLAF+  FLR  W+ + ++ T   TG  V LL  ++ G+ M+ +D  R+IP+  ++++L  +++ SI+D +F+ D        +S++MPF + E+I +SR LRD  LG+I   YP+ K               +TTS+        +QK+W  L + +T LVK L +RD+RR FCP +HWLS +  I  + +   +               +      +DV        L  P LS    R +A+L  +PF VPF +RV IFQR+I  DK+  Q  +  F+ G  V   TI R Y+Y+DA+D+LS E   D+K+ +RV ++NA GLDEAGIDGGG+FREF+++ +K  ++
Sbjct:  260 VFTAFTEEFLAAPFTDQIFHFIIPALADAQTVFPYEPFLNALLLIESRCSRKSGGAPWLFYFVLTVGE-NYLGALSEEGLLVYLRVLQTFLSQL----------PVSPASASCHDSASDSEEESEEADKPSSPEDGRLSVSYITEECLKKLDTKQQTNTLLNLVWRDSASEEVFTT--MASVCHTLMVQHRMM------VPKVRLLYSLAFNARFLRHLWFLISSMSTRMITGSMVPLLQVISRGSPMSFEDSSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEVVGQRQSSMMPFTLEELIMLSRCLRDACLGIIKLAYPETKPEVREEYITAFQSIGVTTSSEMQQCIQMEQKRWIQLFKVITNLVKMLKSRDTRRNFCPPNHWLSEQEDIKADKVTQLYVPASRHVWRFRRMGRIGPLQSTLDV-------GLESPPLSVSEERQLAVLTELPFVVPFEERVKIFQRLIYADKQEVQG-DGPFLDGINV---TIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFN 786

The following BLAST results are available for this feature:

BLAST of TCONS_00061379-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061379-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UBE3C	3.927e-73	30.70	Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UB...	[more]

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TCONS_00061379-protein (polypeptide) - C. hemisphaerica