TCONS_00061226-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061226-protein
Unique NameTCONS_00061226-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length616

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061226-protein ID=TCONS_00061226-protein|Name=TCONS_00061226-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
MDVFNAAQDVYLFDRLKRSDMEIYFVPLPIQVSTVEYKPKVNVDDLKNGY
EEKLLLPFSFCNEIIEHFKSDDDDSDSEVAVVENEYFYYQKQIYSCLRIH
QIKSIKVKLAKEKTWFNRSKSFTAPINLKRVDQSTLSSFMTVIREGNNYS
IAHKDYPGLEISDLASIIGSGWLTLPVLNFYLNLLNKLRKNVFSITLASL
KNIKDDGDCLQKLIASLHEKNITVMNIIANVGKHNGSGETYFSVFSPGFQ
GTHWVCVSLAIPEGRMLYCDSLVWDAPPNIMECLNFITSLFEEQFGIDSF
DLLFANTGKCNDNIFPYQGLNSNMCGVASVISALLMTDDTCKSRVLQGLP
LSEKVSWVGKMHAYNDFVRTVLIKWYQNKTINVIDVGLKSTSQKAESSTS
RNNDNETSRNETARSKTTRKNETAEMGVETNQVEEEIETIETLNDTSADL
THKRRLSLNGWQKYMSENLEKSSDESFGEIAKKARKSWNSLSSEERKNYN
TKAREGKTIPPCHLCGAAFNYAKRRKEHMNICPKTFACTKCELIFESPQA
LKAHDNKHSHKFMCDKPECGKCFECASKLSRHQKTHDKSKDIMCPVCNKK
FSRKDNMVRHQKTKHK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038396XLOC_038396Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061226TCONS_00061226Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR009071HMG_box_dom
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 536..558
e-value: 1.1
score: 18.3
coord: 592..615
e-value: 3.6E-4
score: 29.9
coord: 562..586
e-value: 0.52
score: 19.4
coord: 510..530
e-value: 200.0
score: 1.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 564..586
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 594..615
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 536..563
score: 8.6
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 562..591
score: 13.277
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 592..616
score: 11.198
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 567..613
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 453..530
e-value: 0.0052
score: 26.0
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 456..495
e-value: 4.4E-7
score: 29.6
IPR009071High mobility group box domainPFAMPF09011HMG_box_2coord: 463..507
e-value: 1.3E-4
score: 22.4
IPR009071High mobility group box domainSUPERFAMILY47095HMG-boxcoord: 452..507
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 573..590
e-value: 8.6E-8
score: 31.6
NoneNo IPR availableGENE3D3.30.160.60coord: 547..572
e-value: 0.02
score: 14.6
NoneNo IPR availableGENE3D3.30.160.60coord: 521..546
e-value: 2.9E-6
score: 26.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 594..615
e-value: 4.0E-5
score: 23.7
NoneNo IPR availableGENE3D3.40.395.10coord: 211..329
e-value: 2.4E-4
score: 20.2
NoneNo IPR availableGENE3D3.30.160.60coord: 591..615
e-value: 5.2E-7
score: 29.3
NoneNo IPR availableGENE3D2.20.28.30coord: 496..520
e-value: 0.53
score: 10.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..430
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 453..507
e-value: 2.43589E-5
score: 41.4594
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 148..327

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061226-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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