TCONS_00061020-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061020-protein
Unique NameTCONS_00061020-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061020-protein ID=TCONS_00061020-protein|Name=TCONS_00061020-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
MSCKAPVCKIGPSILNADLSDLTYECENLLQCGADYLHLDVMDGHFVPNL
TFGAPVVKCLRSKIEKAFFDMHMMVANPLDWIKDMADAGADQYTFHIEAT
NEPGTVIRKIKEAGMKVGLGVKPKTDVATILEYMSDVDMVLIMTVEPGFG
GQKFMTDMMPKVELLREKFPLIDIEVDGGVGPKNIEVVGQAGANMIVSGT
AVVKNPDRRQAISDLRAGIEKFLSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038304XLOC_038304Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061020TCONS_00061020Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000056Ribul_P_3_epim-like
IPR026019Ribul_P_3_epim
IPR013785Aldolase_TIM
IPR011060RibuloseP-bd_barrel
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006098pentose-phosphate shunt
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0004750ribulose-phosphate 3-epimerase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0006098 pentose-phosphate shunt
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
molecular_function GO:0004750 ribulose-phosphate 3-epimerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000056Ribulose-phosphate 3-epimerase-likeTIGRFAMTIGR01163TIGR01163coord: 9..216
e-value: 1.5E-67
score: 225.0
IPR000056Ribulose-phosphate 3-epimerase-likePFAMPF00834Ribul_P_3_epimcoord: 9..202
e-value: 2.1E-66
score: 223.0
IPR000056Ribulose-phosphate 3-epimerase-likePROSITEPS01086RIBUL_P_3_EPIMER_2coord: 140..162
IPR000056Ribulose-phosphate 3-epimerase-likePROSITEPS01085RIBUL_P_3_EPIMER_1coord: 37..51
IPR000056Ribulose-phosphate 3-epimerase-likeCDDcd00429RPEcoord: 9..216
e-value: 2.107E-111
score: 320.196
IPR026019Ribulose-phosphate 3-epimerasePIRSFPIRSF001461RPEcoord: 4..225
e-value: 7.0E-85
score: 281.6
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..220
e-value: 8.0E-91
score: 302.6
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 8..220

Blast
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BLAST of TCONS_00061020-protein vs. Swiss-Prot (Human)
Match: RPE (Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=RPE PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 6.200e-96
Identity = 130/210 (61.90%), Postives = 162/210 (77.14%), Query Frame = 0 
Query:    8 CKIGPSILNADLSDLTYECENLLQCGADYLHLDVMDGHFVPNLTFGAPVVKCLRSKI-EKAFFDMHMMVANPLDWIKDMADAGADQYTFHIEATNEPGTVIRKIKEAGMKVGLGVKPKTDVATILEYMSDVDMVLIMTVEPGFGGQKFMTDMMPKVELLREKFPLIDIEVDGGVGPKNIEVVGQAGANMIVSGTAVVKNPDRRQAISDLR 216
            CKIGPSILN+DL++L  EC  +L  GADYLHLDVMDGHFVPN+TFG PVV+ LR ++ +  FFDMHMMV+ P  W+K MA AGA+QYTFH+EAT  PG +I+ I+E GMKVGL +KP T V  +  + + +DM L+MTVEPGFGGQKFM DMMPKV  LR +FP +DIEVDGGVGP  +    +AGANMIVSG+A++++ D R  I+ LR
Sbjct:    5 CKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLR 214
The following BLAST results are available for this feature:
BLAST of TCONS_00061020-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RPE6.200e-9661.90Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=... [more]
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