TCONS_00060901-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060901-protein
Unique NameTCONS_00060901-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060901-protein ID=TCONS_00060901-protein|Name=TCONS_00060901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MYKNVKLITFDAMNTLFTTKLPPGMSYYHAAKKMYPHLKEETEEISLCVT
NNFKEVYKIYYGEYTLNGQSKETCKTFWEGVIGKTLYKSGVDLTEIEMKN
VTDQLYGEYSTSKYWKPFNETHKVLDKLHAKGMRLGIVSNFDERLENVLK
SLDLMKYMEFVIFPPVTKGLGKPNPRVFQQLLKEYANCQPEEIVHIGDDK
ENDFIAAKKAGIKPLLLDKFNTQSDPNYITMTSLNDIFKFVEFDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038231XLOC_038231Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060901TCONS_00060901Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
IPR006439HAD-SF_hydro_IA
IPR011949HAD-SF_hydro_IA_REG-2-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016787 hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD-like domainPFAMPF13419HAD_2coord: 57..213
e-value: 1.4E-21
score: 77.3
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 94..244
e-value: 3.1E-23
score: 81.9
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 4..240
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01549TIGR01549coord: 84..211
e-value: 2.9E-11
score: 41.9
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01509TIGR01509coord: 97..213
e-value: 1.8E-8
score: 32.6
IPR011949HAD-superfamily hydrolase, subfamily IA, REG-2-likeTIGRFAMTIGR02252TIGR02252coord: 6..216
e-value: 1.6E-46
score: 156.6
NoneNo IPR availableCDDcd01427HAD_likecoord: 115..216
e-value: 1.11818E-15
score: 69.7063

Blast
[Close]
BLAST of TCONS_00060901-protein vs. Swiss-Prot (Human)
Match: HDHD3 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.449e-20
Identity = 67/246 (27.24%), Postives = 118/246 (47.97%), Query Frame = 0 
Query:    4 NVKLITFDAMNTLFTTKLPPGMSYYHAAKKMYPHLKEETEEISLCVTNNFKEVYKIYYGEYTLNGQSKE-TCKTFWEGVIGKTLYKSGVDLTEIEMKNVTDQLYGEYSTSKYWKPFNETHKVLDKLHAKGMRLGIVSNFDERLENVLKSLDLMKYMEFVIFPPVTKGLGKPNPRVFQQLLKEYANCQPEEIVHIGDDKENDFIAAKKAG------IKPLLLDKFNTQSDPNYITMTSLNDIFKFVE 242
             ++L+T+D  +TL   + P G +Y   A K   H   E E  +L     F++ Y+     +   G S   T + +W  V+ +T + +GV   +  +  + +QLY ++S    W+  +     L +   +G+RL ++SNFD RLE +L  L L ++ +FV+      G  KP+PR+FQ+ L+  A+ +P    H+GD+   D+   +  G      + P  LD     S P    + SL  +   ++
Sbjct:    6 QIRLLTWDVKDTLLRLRHPLGEAY---ATKARAH-GLEVEPSAL--EQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQ-AVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAA-GWPKPDPRIFQEALR-LAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALD 242
The following BLAST results are available for this feature:
BLAST of TCONS_00060901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDHD37.449e-2027.24Haloacid dehalogenase-like hydrolase domain-contai... [more]
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