TCONS_00060850-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060850-protein
Unique NameTCONS_00060850-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060850-protein ID=TCONS_00060850-protein|Name=TCONS_00060850-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MAVKNFSWTVVFFISIFLTIISSYFTVNGNEINLGNLAEIFSTLAGGEGC
VFRCPKGSPKRNPGHEPTSNGCGSYGVKFDTSQYPGFEGCCNTHDKCYDT
CNNEREDCDKQFQECLKDSCLFHTVKGGVEKKHSRKKLKDCEGIADVMYA
GTLGLGCGSYLEAQRNACLCDGKTLSKKQMQKIQQNEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038214XLOC_038214Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060850TCONS_00060850Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016090PLipase_A2_dom
IPR010711PLA2G12
Vocabulary: Molecular Function
TermDefinition
GO:0004623phospholipase A2 activity
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0050482arachidonic acid secretion
GO:0006644phospholipid metabolic process
GO:0016042lipid catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050482 arachidonic acid secretion
biological_process GO:0016042 lipid catabolic process
biological_process GO:0006644 phospholipid metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004623 phospholipase A2 activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016090Phospholipase A2 domainGENE3D1.20.90.10coord: 50..156
e-value: 1.4E-18
score: 66.5
IPR016090Phospholipase A2 domainSUPERFAMILY48619Phospholipase A2, PLA2coord: 61..151
IPR010711Group XII secretory phospholipase A2 precursorPFAMPF06951PLA2G12coord: 43..173
e-value: 7.2E-31
score: 107.4

Blast
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BLAST of TCONS_00060850-protein vs. Swiss-Prot (Human)
Match: PG12A (Group XIIA secretory phospholipase A2 OS=Homo sapiens GN=PLA2G12A PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.989e-19
Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 0 
Query:   44 LAGGEG--CVFRCPKGS-PKRNPGHEPTS-NGCGS--YGVKFDTSQYPGFEGCCNTHDKCYDTCNNEREDCDKQFQECLKDSCLFHTVKGGVEKKHSRKKLKDCEGIADVMYAGTLGLGCGSYLEAQRNACLC 170
            L GGE   C ++C  GS P    G++P+  NGCGS  +GV  +    P    CCN HD+CY+TC   + DCD++FQ CL   C       G+      + ++ CE   ++++   + LGC  YL++QR AC C
Sbjct:   55 LLGGEDGLCQYKCSDGSKPFPRYGYKPSPPNGCGSPLFGVHLNIG-IPSLTKCCNQHDRCYETCGKSKNDCDEEFQYCLSKICRDVQKTLGLT-----QHVQACETTVELLFDSVIHLGCKPYLDSQRAACRC 181
The following BLAST results are available for this feature:
BLAST of TCONS_00060850-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PG12A1.989e-1936.84Group XIIA secretory phospholipase A2 OS=Homo sapi... [more]
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