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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060845-protein ID=TCONS_00060845-protein|Name=TCONS_00060845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=657bp
MFKFVMTKNSIELFHRAILSNDLSRTKLILEEAMKDPRFDIDEINEEGLT
ALQFSCFAGHLEIVKVLISYKADVKKRDRDGNSLLHAAALAGKVDIVKYL
LRCGIKPTIRNDDNQMPIDFSEEIAIIVILLRAMLDQGYLEEMQEYMIDH
PKLKRNIFEELKRVKCRETEQNQILQELPYSSHTSPRRQINKSRKPSDEL
QGRSISTFSKLSDSMQYLDQIDRNETNNNYNQHYHKNNGYSYDNAPTLKR
NNSTSSSSSHGSRSSRSSKGSGAGILRHESNDYESRHKQTQKYLENRFPQ
SMKSVSFESDHQGGNNRSYSDGYHSDSFDDKIPKGRLSRSSSISSHSSNH
TGVFSDTCSNFDFPTQPPPHEPPKTPTPQQEEAIYANFQPVRSNSLPTIA
EGENIYENLPLRGIKPSPKQQTPKFVAPPLPPRQPTTPPKPKPQQSNRHS
NLYEYESTSYSTNTYQRDTSYPVNTNQRDTSYSANERQLGSETDSGIDIN
ETAGRVFALSLDDQQQPIYPETPNIVEPPTQTSYSKPIGIYYSQQMNVTA
RQSGKRDNNVLIAANTHAHLNPKYRSWNGRTLLESQQQAQDNLAPYSNHG
SRSSGHPQRTSRDDYDVYKSQQAHAQEQNGYQAQRRHTNSGLELRQFNFD
HQPEIML Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 80..109
e-value: 3.6E-4
score: 29.9
coord: 9..39
e-value: 3800.0
score: 0.7
coord: 47..76
e-value: 0.0033
score: 26.7 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 47..79
score: 11.434 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 80..112
score: 11.861 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 5..302
e-value: 2.2E-27
score: 94.9 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 14..111
e-value: 4.5E-14
score: 52.7 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 9..138
score: 23.551 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 7..121 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 177..205 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 410..497 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 305..379 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 226..290 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 589..635 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 14..131
e-value: 6.54471E-24
score: 97.069 |
Blast
The following BLAST results are available for this feature:
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