TCONS_00060833-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060833-protein
Unique NameTCONS_00060833-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length399

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060833-protein ID=TCONS_00060833-protein|Name=TCONS_00060833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=399bp
MASIRSLIRLASNSSRQINSKANQTAITASILKQHQRFLSSNMEEAKKRV
GLLTEDPGNEVKLKMYALYKQASEGKCNTKKPGVFDFVGQAKWNAWNELG
DISKEEAENQYIALVDSLAGSSSASGGETKSETTDSETASGTVPGLDITR
EDGVLTMTINRPKKLNAITNEMYACIRDTLNSAAKDDSVRVFVLTGAGNF
YSSGNDLANFTNIPPEGPAKLAADGHILLKSFVQAFINFPKPLVCAVNGP
ALGIMVTTMALADLVYSADNATFHTPFMTLGQSPEGCSSYTFPRIMGYAR
ANEVLLAGRKLTAQEAFDRGLVTDIIPQGEFREFIAEKTKYLAGLPPKSV
MYSKALNRLREKETLERVNEEECVRLEERWLSEECMNAVMSFLAKSSKM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038201XLOC_038201Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060833TCONS_00060833Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000582Acyl-CoA-binding_protein
IPR001753Crotonase_core_superfam
IPR014748Crontonase_C
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR022408Acyl-CoA-binding_prot_CS
IPR029045ClpP/crotonase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0000062fatty-acyl-CoA binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0000062 fatty-acyl-CoA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000582Acyl-CoA-binding protein, ACBPPRINTSPR00689ACOABINDINGPcoord: 57..75
score: 51.38
coord: 40..55
score: 25.3
coord: 101..118
score: 44.18
coord: 80..95
score: 48.51
IPR000582Acyl-CoA-binding protein, ACBPPFAMPF00887ACBPcoord: 45..118
e-value: 8.5E-27
score: 93.1
IPR000582Acyl-CoA-binding protein, ACBPPROSITEPS51228ACB_2coord: 39..124
score: 39.111
IPR000582Acyl-CoA-binding protein, ACBPSUPERFAMILY47027Acyl-CoA binding proteincoord: 44..119
IPR001753Crotonase superfamilyPFAMPF00378ECH_1coord: 150..393
e-value: 1.6E-38
score: 132.4
IPR014748Crontonase, C-terminalGENE3D1.10.12.10coord: 362..396
e-value: 3.5E-16
score: 58.5
NoneNo IPR availableGENE3D3.90.226.10coord: 146..361
e-value: 6.4E-54
score: 182.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..145
NoneNo IPR availableCDDcd06558crotonase-likecoord: 146..337
e-value: 4.79663E-61
score: 197.013
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 28..140
e-value: 2.0E-27
score: 94.7
IPR022408Acyl-CoA-binding protein, ACBP, conserved sitePROSITEPS00880ACB_1coord: 57..75
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 147..396

Blast
[Close]
BLAST of TCONS_00060833-protein vs. Swiss-Prot (Human)
Match: ECI2 (Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4)

HSP 1 Score: 374.785 bits (961), Expect = 2.236e-128
Identity = 197/399 (49.37%), Postives = 261/399 (65.41%), Query Frame = 0 
Query:    7 LIRLASNSSRQINS------KANQTAITASILKQHQRFLSSNMEEAKKRVGLLTEDPGNEVKLKMYALYKQASEGKCNTKKPGVFDFVGQAKWNAWNELGDISKEEAENQYIALVDSLAGSSSASGGETKSETTDSETASGTVPGLDITREDGVLTMTINRPKKLNAITNEMYACIRDTLNSAAKDDSVRVFVLTGAGNFYSSGNDLANFTNIPPEGPAKLAADGHILLKSFVQAFINFPKPLVCAVNGPALGIMVTTMALADLVYSADNATFHTPFMTLGQSPEGCSSYTFPRIMGYARANEVLLAGRKLTAQEAFDRGLVTDIIPQGEFREFIAEKTKYLAGLPPKSVMYSKALNRLREKETLERVNEEECVRLEERWLSEECMNAVMSFLAKSSKM 399
            L R +  SS Q+ S        N+TA+ AS           + E +  +V LL +DPGNEVKLK+YALYKQA+EG CN  KPGVFD + +AKW+AWN LG + KE A   Y   VD ++  S +    ++ E      ++G    L +T EDG+  +  NRPKK NAI  EMY  I   L +A+KDDS+ + VLTG G++YSSGNDL NFT+IPP G  + A +  +LL+ FV  FI+FPKPL+  VNGPA+GI VT + L D VY++D ATFHTPF  LGQSPEGCSSYTFP+IM  A+A E+L+ G+KLTA EA  +GLVT++ P   F++ +  + K  A LPP ++  SK + R RE+E L  VN EEC  L+ RWLS+EC NAV++FL++ SK+
Sbjct:   10 LARRSCPSSLQVTSFPVVQLHMNRTAMRAS---------QKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNY---VDLVSSLSPSLESSSQVEPGTDRKSTG-FETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 394
The following BLAST results are available for this feature:
BLAST of TCONS_00060833-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECI22.236e-12849.37Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo... [more]
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