TCONS_00060774-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060774-protein
Unique NameTCONS_00060774-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060774-protein ID=TCONS_00060774-protein|Name=TCONS_00060774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
MSEVPEQQTNINEFWDCISEIVQGGNDFMTPSPLDNDYSENGEEEENKFT
FMYQEQPYPSPEYYNQYTNLDNTKIQSQQFIDSVLQGQQLAQAKIESQQF
MDDVLKGENNGAYTTNNNYMASPTLSQSSNSKIQDVSYLKAILQNTAMTV
QAPHSQQPELFVTQASPLSVQHDDDDDDDEIDIDSVVLFNDDIPPKEDDT
ALVSDEELVTLSVRDLNKRLRNLTKDEKIKYKQRRRLLKNRGYAQTCRTR
RIHNQHAKIIENEKLKEVLQQITLERNLYKTKYENLKAVIKKAKIEREKR
KDSVQA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038186XLOC_038186Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060774TCONS_00060774Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004826bZIP_Maf
IPR008917TF_DNA-bd
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 262..303
NoneNo IPR availableGENE3D1.10.880.10coord: 38..258
e-value: 9.1E-20
score: 70.6
IPR004826Basic leucine zipper domain, Maf-typePFAMPF03131bZIP_Mafcoord: 203..288
e-value: 4.9E-21
score: 75.0
IPR008917Transcription factor, Skn-1-like, DNA-binding domainSUPERFAMILY47454A DNA-binding domain in eukaryotic transcription factorscoord: 203..243

Blast
[Close]
BLAST of TCONS_00060774-protein vs. Swiss-Prot (Human)
Match: MAF (Transcription factor Maf OS=Homo sapiens GN=MAF PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.335e-21
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 0 
Query:  203 VSDEELVTLSVRDLNKRLRNLTKDEKIKYKQRRRLLKNRGYAQTCRTRRIHNQHAKIIENEK---------LKEVLQQITLERNLYKTKYENL 286
             SDE+LVT+SVR+LN++LR ++K+E I+ KQ+RR LKNRGYAQ+CR +R+  +H  ++E+EK         LK+ + ++  ER+ YK KYE L
Sbjct:  261 FSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRH--VLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKL 351
The following BLAST results are available for this feature:
BLAST of TCONS_00060774-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAF7.335e-2148.39Transcription factor Maf OS=Homo sapiens GN=MAF PE... [more]
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