TCONS_00060745-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060745-protein
Unique NameTCONS_00060745-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060745-protein ID=TCONS_00060745-protein|Name=TCONS_00060745-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
MNNIDILSEDLAVSKSSSKDKNFDVIVGHIEDIVVSETFQEMQSKFMNKY
CTEFEDSEENKLSYTPIFNEYVEMFEKFIGDELTKRQPGFHMKDFMKQLS
KRSNEISEELFEMLSSFTEFLVFKELMVDHKAFTEGRCVDFSMDLTIRPI
KNVDRDEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038164XLOC_038164Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060745TCONS_00060745Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023379ARF-like_2-bdp_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023379ADP-ribosylation factor-like 2-binding protein, domainGENE3D1.20.1520.10coord: 9..138
e-value: 5.8E-31
score: 106.5
IPR023379ADP-ribosylation factor-like 2-binding protein, domainPFAMPF11527ARL2_Bind_BARTcoord: 23..134
e-value: 1.7E-29
score: 102.2

Blast
[Close]
BLAST of TCONS_00060745-protein vs. Swiss-Prot (Human)
Match: AR2BP (ADP-ribosylation factor-like protein 2-binding protein OS=Homo sapiens GN=ARL2BP PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.033e-40
Identity = 61/131 (46.56%), Postives = 92/131 (70.23%), Query Frame = 0 
Query:   20 DKNFDVIVGHIEDIVVSETFQEMQSKFMNKYCTEFEDSEENKLSYTPIFNEYVEMFEKFIGDELTKRQPGFHMKDFMKQLSKRSNEISEELFEMLSSFTEFLVFKELMVDHKAFTEGRCVDFSMDLTIRPI 150
            D  FD +VG++EDI++ + FQ +Q  FM+KY  EFED+EENKL YTPIFNEY+ + EK+I ++L +R P F+M  F   L    +E++ ++F+ML +FT+FL FKE+ +D++A  EGR +D S  L +  +
Sbjct:   18 DAEFDAVVGYLEDIIMDDEFQLLQRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPEFNMAAFTTTLQHHKDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSGLVVTSL 148
The following BLAST results are available for this feature:
BLAST of TCONS_00060745-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AR2BP1.033e-4046.56ADP-ribosylation factor-like protein 2-binding pro... [more]
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