TCONS_00060579-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060579-protein
Unique NameTCONS_00060579-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length434

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060579-protein ID=TCONS_00060579-protein|Name=TCONS_00060579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
MFLQRITRTQTSKEVLNSFKKSLLPVNNDGVQTGRSRFRTPWAQRIRSLV
TITSVEKISDEGVKIRFDNHAQEHKFSNIWLRDHCRCSECYFKETTQRRS
ETHSIPLDLKMTDVRVDNDQVKFSFSDGHVTSFDADWLFENQYGKKLYEA
FTFESEKRKFWDKGQENDMVPDISFGEVISNKEALYELLKNIAIYGHAFV
SDTPSDVHKGVAEIGKAIGLLRATPYGTVWSIRGEEQLEGADYKDSSYWD
ISLPGHTDGTYNIDAPGLQFFNIPSHVGLGGESLLVDAIHCAHILRQKNK
EAFEFLSTTSIPSLYYDGDNIFKGYGPVIKLYPGTDTIYQVRINDLDRDT
LSCLEYEDVKMFYRSIHLFTEILRHESNEVWFKLRHDQTMITDNWRVLHG
RKQFTGVRYLQGGYLNREDYLSKLNVLHMKYRKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038105XLOC_038105Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060579TCONS_00060579Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003819TauD/TfdA-like
IPR010376DUF971
IPR012776Trimethyllysine_dOase
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0045329carnitine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005506iron ion binding
GO:0050353trimethyllysine dioxygenase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045329 carnitine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0050353 trimethyllysine dioxygenase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003819TauD/TfdA-like domainPFAMPF02668TauDcoord: 173..414
e-value: 4.3E-22
score: 79.0
IPR010376Domain of unknown function DUF971PFAMPF06155DUF971coord: 61..138
e-value: 3.9E-14
score: 53.0
IPR012776Trimethyllysine dioxygenaseTIGRFAMTIGR02410TIGR02410coord: 75..427
e-value: 1.1E-82
score: 276.5
NoneNo IPR availableGENE3D3.60.130.10coord: 81..429
e-value: 7.4E-38
score: 130.1
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 124..430

Blast
[Close]
BLAST of TCONS_00060579-protein vs. Swiss-Prot (Human)
Match: TMLH (Trimethyllysine dioxygenase, mitochondrial OS=Homo sapiens GN=TMLHE PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 7.260e-68
Identity = 132/415 (31.81%), Postives = 204/415 (49.16%), Query Frame = 0 
Query:   21 KSLLPVNNDGVQTGRSRFRTPWAQRIRSLVTITSVEKISDEGVKIRFDNHAQEHKFSNIWLRDHCRCSECYFKETTQRRSETHSIPLDLKMTDVRVDNDQVKFSFSDGHVTSFDADWLFENQYGKKLYEAFTFESEKRKFWDKG-QENDMVPDISFGEVISNKEALYELLKNIAIYGHAFVSDTPSDVHKGVAEIGKAIGLLRATPYGTVWSIRGEEQLEGADYKDSSYWDISLPGHTDGTYNIDAPGLQFFNIPSHVGLGGESLLVDAIHCAHILRQKNKEAFEFLSTTSIPSLYYD----GDNIFKGYGPVIKLYPGTDTIYQVRINDLDRDTLSCLEYEDVKMFYRSIHLFTEILRHESNEVWFKLRHDQTMITDNWRVLHGRKQFTGVRYLQGGYLNREDYLSKLNVLHMK 430
            KSLLP+      T        W Q               ++  ++++ N     +F  +WLRDHCR + CY  +T QR  +T S+ L +K   +R+D   + F++ DGHVT +D +WL +N Y  +  +      + R  W+    +   VP +     +   E L + L+N  +YG AFV + P    +   ++ + I L+R T YG +W    +         D++Y  ++L  HTD TY  +  G+Q F+   H G GG +LLVD  + A  + QK  E FE LS   +   Y +      N   G GPV+ +YP    +Y +R N+ DR  ++ + Y+ V  +Y +    T  LR   NE W KL+  + +  DNWRVLHGR+ FTG R L G YL R+D L+   +L ++
Sbjct:   32 KSLLPLAVHWHHTASKSLTCAWQQH--------------EDHFELKYANTVM--RFDYVWLRDHCRSASCYNSKTHQRSLDTASVDLCIKPKTIRLDETTLFFTWPDGHVTKYDLNWLVKNSYEGQKQKVI----QPRILWNAEIYQQAQVPSVDCQSFLETNEGLKKFLQNFLLYGIAFVENVPP-TQEHTEKLAERISLIRETIYGRMWYFTSD-----FSRGDTAYTKLALDRHTDTTYFQEPCGIQVFHCLKHEGTGGRTLLVDGFYAAEQVLQKAPEEFELLSKVPLKHEYIEDVGECHNHMIGIGPVLNIYPWNKELYLIRYNNYDRAVINTVPYDVVHRWYTAHRTLTIELRRPENEFWVKLKPGRVLFIDNWRVLHGRECFTGYRQLCGCYLTRDDVLNTARLLGLQ 420
The following BLAST results are available for this feature:
BLAST of TCONS_00060579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMLH7.260e-6831.81Trimethyllysine dioxygenase, mitochondrial OS=Homo... [more]
back to top