TCONS_00060536-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060536-protein
Unique NameTCONS_00060536-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060536-protein ID=TCONS_00060536-protein|Name=TCONS_00060536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=192bp
CQHVIGTKSRLEYVQFDLENDDEWVAGETAFEEPSAYGEITKDKKHLKLY
HCYYEPIPSCGVPTFGSNSIDYNQSEFNVGHKLNYACPRGFSNAGDSNDV
CLVEEMWSSLEGANCEDINECVSKNKVTRHQCHRKANCYNTPGSYRCKCN
PGWQGNGRNCYFTNCTRPKPIANGELRFSSDSRTFLLNDQVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038077XLOC_038077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060536TCONS_00060536Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR000436Sushi_SCR_CCP_dom
IPR018097EGF_Ca-bd_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 120..161
e-value: 0.01
score: 25.1
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 117..161
score: 14.29
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 117..161
e-value: 9.3E-10
score: 48.4
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 117..160
e-value: 7.5E-9
score: 35.6
NoneNo IPR availableGENE3D2.10.25.10coord: 112..162
e-value: 9.6E-15
score: 53.9
NoneNo IPR availableGENE3D2.10.70.10coord: 59..111
e-value: 9.0E-7
score: 28.9
NoneNo IPR availableCDDcd00054EGF_CAcoord: 117..160
e-value: 1.91048E-7
score: 44.1646
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 115..160
IPR000436Sushi/SCR/CCP domainPFAMPF00084Sushicoord: 60..115
e-value: 7.6E-5
score: 23.2
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 58..117
score: 9.038
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 59..115
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 117..147
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 138..149
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 147..160

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060536-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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