TCONS_00060516-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060516-protein
Unique NameTCONS_00060516-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060516-protein ID=TCONS_00060516-protein|Name=TCONS_00060516-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
LPIWWSQAVRRLCHFRWPLSRVRSHIHRLSSGVLYRVLKSGRLTSIRSKT
PISELNRIRKQNDGLYNRKSCLPGYESYMKTTEVSPVRTSFAWKCIPCEP
GYAKSSHSNHSCKACTQYFEPNADKTFCIDPYTNYYLNFDRHSIYIFIFC
NGAVSLFLCIALVIFIVKRDTPLVRSSDLPLTLTQICAHLIVSINLPLTF
IGKPTVSKCIPMFSATGSFLIFANTITLTRSHKFVYIFKQMRRLSQNHVK
KTQTMHYSSLVFFQLLYIVSCVFISWSQNEWIKETIYPETKRREIYCNVT
IQMKGLNCYLMLIVLGSFIQCFRARKLPKNLNESKRILYSSFLKFVLLAV
HFPIWYGQKTDLDRASVRLFALALFNAFDVIFKIGYMVFIVYFRADRNTK
ESFRKEIFDSIRSR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038064XLOC_038064Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060516TCONS_00060516Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000337GPCR_3
IPR017978GPCR_3_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000337GPCR, family 3PRINTSPR00248GPCRMGRcoord: 171..193
score: 23.91
coord: 332..353
score: 24.72
coord: 217..238
score: 18.04
coord: 309..332
score: 33.07
NoneNo IPR availableGENE3D2.10.50.10coord: 51..188
e-value: 2.4E-4
score: 20.8
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 157..362
e-value: 4.0E-16
score: 59.4
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 160..407
score: 14.607

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060516-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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