TCONS_00060489-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060489-protein
Unique NameTCONS_00060489-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060489-protein ID=TCONS_00060489-protein|Name=TCONS_00060489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MACAALKRPHNFDLLGNSPDHKVSASPKRRRCGAVVTSCSSTSISPFLEA
TPKLCKDELAKNVQDEWRRIQRRRRLACPSSPQNNTSNLQSLFGSPTSFN
TGYWSPPRGSMSPCSSSMSPPRTTTERSEQTSLNVKQVVSLCERLWKERE
DKLREEYDKVLNDRLSEQYDSFLKFTQDQIMRKYQNSSCSYVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038051XLOC_038051Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060489TCONS_00060489Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..131

Blast
[Close]
BLAST of TCONS_00060489-protein vs. Swiss-Prot (Human)
Match: AKIR1 (Akirin-1 OS=Homo sapiens GN=AKIRIN1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.145e-25
Identity = 74/223 (33.18%), Postives = 105/223 (47.09%), Query Frame = 0 
Query:    1 MACAA-LKRPHNFDLLGNSPDHKVSASPKRRRCGAV---------------VTSCSSTSISPFLEATPKLCK------DELAKNVQDEWRRIQRRRRL--------ACPSSPQNNTSNLQSLFGSPTSFNTGYWSPPRGSMSPCSSSMSPPRTTTERSEQTSLNVKQVVSLCERLWKEREDKLREEYDKVLNDRLSEQYDSFLKFTQDQIMRKYQNSSCSYVS 193
            MAC A LKRP  F+    SP      SPKRRRC  +                   + T      +  P   +      +++ +N++ E+ R QR R L        AC S  Q ++S L +                    SP SS M        + +Q +  ++QV  +CERL K+ EDK+REEY+++LN +L+EQY+SF+KFT DQIMR+Y     SYVS
Sbjct:    1 MACGATLKRPMEFEAALLSP-----GSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTA------------------PSSPGSSWM--------KKDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIMRRYGTRPTSYVS 192
The following BLAST results are available for this feature:
BLAST of TCONS_00060489-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AKIR15.145e-2533.18Akirin-1 OS=Homo sapiens GN=AKIRIN1 PE=1 SV=1[more]
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