TCONS_00060375-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060375-protein
Unique NameTCONS_00060375-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length871

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060375-protein ID=TCONS_00060375-protein|Name=TCONS_00060375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=871bp
QFASDHYSSVETDMEDITLDCYAIQDNNLNSQISVKYAKDPVNTTIGDPK
NCCKYPFLVLNENCQDALDTTEKLVQTCTNAPKEFGYRYCMDCAHDSATP
GQPFKKPCAKDPPRAIEDTNLAEATTFFEEYVLEDSSLSVDDDYFNKKVA
GFSVDGQGARVWFTRSSWHGMPSALSAGSNIMLKLYTNDSAYGIQTSNHP
LPKNALEKSSASSSSGTLNLANFLAMAASFIAASFITFLVQEKTSKAKHI
QFVSGVSSVCYWLATFCWDFINYLVPAIIIFILFAAFNLDEFNGELGAIF
IVLILFACAMLPFVYMMSFVFTSSLIAYSVVALILLVISLAMVIAVFILD
ATQEYDIADALHHVFLLLPSYALPKAVMDIGLNKQRRDSCNIDASAKREC
VRFNLKYRDDTFDMEGPGIGTHCLFMFLECIVYFLIVILIEEGFFLGKCF
GGGRSTTFSVNAREDMDVQEERKKIHNMAQENIKNSALVVKNLTKVYRSS
GMMAVDHLCFEVPKKECFGLLGVNGAGKTTTFGMLTGELGITDGTAFLDG
FNIQSHLKDVQQRLGYCPQFDALIEKMTGREMLRMFARLRGCPPHKLENV
VDEAIAQLNLGKWADKMCGDYSGGNKRKLSTAIALVGDPPIVFLDEPTSG
MDPASRRFLWNTLSGVLNSGRSIVLTSHSMEECEALCTRLVIMVNGQLKC
IGSIQHLKSRYGQGYTLMMKIGSSNPQQQQAQNDTIYDGPKAEHQNGVTN
QAYSGDNVDKLQPPQNNPLHRVPSAQTIADNTTKAMTFIQETFPGAYLIE
QRQGYVQYQIYNPELRWSQIFGALEERVRDFGVVDYSVSQTSLEQVFINF
AKEQHAEDRKFNKGCCSCSCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037990XLOC_037990Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060375TCONS_00060375Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 514..698
e-value: 8.8E-8
score: 41.8
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 506..649
e-value: 6.2E-22
score: 78.5
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 488..720
score: 17.46
NoneNo IPR availableGENE3D3.40.50.300coord: 484..792
e-value: 3.4E-67
score: 226.5
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 155..439
e-value: 1.9E-47
score: 162.0
NoneNo IPR availableCDDcd03263ABC_subfamily_Acoord: 488..708
e-value: 3.95277E-115
score: 351.422
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 487..711

Blast
BLAST of TCONS_00060375-protein vs. Swiss-Prot (Human)
Match: ABCA1 (ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1 PE=1 SV=3)

HSP 1 Score: 495.352 bits (1274), Expect = 1.278e-152
Identity = 284/719 (39.50%), Postives = 412/719 (57.30%), Query Frame = 0
Query:  159 ARVWFTRSSWHGMPSALSAGSNIMLKLY----TNDSAYGIQTSNHPL--PKNALEKSSASSSSGTLNLANFLAMAASFIAASFITFLVQEKTSKAKHIQFVSGVSSVCYWLATFCWDFINYLVPAIIIFILFAAFNLDEF--NGELGAIFIVLILFACAMLPFVYMMSFVFTSSLIAYSVVALILLVISLAMVIAVFILDA---TQEYDIADALHHVFLLLPSYALPKAVMDIGLNKQRRDSCNIDASAKRECVRF--NLKYRDDTFDMEGPGIGTHCLFMFLECIVYFLIVILIEEGFFLGKCFGGGRSTTFSVNAR------EDMDVQEERKKIHNMAQENIKNSALVVKNLTKVYRSSGMMAVDHLCFEVPKKECFGLLGVNGAGKTTTFGMLTGELGITDGTAFLDGFNIQSHLKDVQQRLGYCPQFDALIEKMTGREMLRMFARLRGCPPHKLENVVDEAIAQLNLGKWADKMCGDYSGGNKRKLSTAIALVGDPPIVFLDEPTSGMDPASRRFLWNTLSGVLNSGRSIVLTSHSMEECEALCTRLVIMVNGQLKCIGSIQHLKSRYGQGYTLMMKIGSSNPQQQQAQNDTIYDGPKAEHQNGVTNQAYSGDNVDKLQPPQNNPLHRVPSAQTIADNTTKAMTFIQETFPGAYLIEQRQGYVQYQIYNPELRWSQIFGALEERVRDFGVVDYSVSQTSLEQVFINFAKEQHAED 858
             +VWF    WH + S L+  +N +L+       N S YGI   NHPL   K  L + +  ++S  + ++  +  A SF+ ASF+ FL+QE+ SKAKH+QF+SGV  V YWL+ F WD  NY+VPA ++ I+F  F    +  +  L  + ++L+L+  ++ P +Y  SFVF     AY V+  + L I +   +A F+L+     +  +I D L  VFL+ P + L + ++D+  N+   D+            RF  N      ++D+    +G +   M +E +V+FLI +LI+  FF+             VNA+      ED DV+ ER++I +   +N     L +K LTK+YR     AVD +C  +P  ECFGLLGVNGAGK++TF MLTG+  +T G AFL+  +I S++ +V Q +GYCPQFDA+ E +TGRE +  FA LRG P  ++  V + AI +L L K+ +K  G+YSGGNKRKLSTA+AL+G PP+VFLDEPT+GMDP +RRFLWN    V+  GRS+VLTSHSMEECEALCTR+ IMVNG+ +C+GS+QHLK+R+G GYT++++I  SNP                                  L+P Q+                     F    FPG+ L E+ +  +QYQ+ +     ++IF  L +  +   + DYSVSQT+L+QVF+NFAK+Q  +D
Sbjct: 1590 VKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALE----------RFGENRFVSPLSWDL----VGRNLFAMAVEGVVFFLITVLIQYRFFI---------RPRPVNAKLSPLNDEDEDVRRERQRILDGGGQN---DILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPD---------------------------------LKPVQD---------------------FFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDD 2228          

HSP 2 Score: 206.068 bits (523), Expect = 1.583e-54
Identity = 173/649 (26.66%), Postives = 304/649 (46.84%), Query Frame = 0
Query:  223 FLAMAASFIAASFITFLVQEKTSKAKHIQFVSGVSSVCYWLATFCWDFINYLVPAIIIFILFAAFNLDEFNGELGAIFIVLILFACAMLPFVYMMSFVFTSSLIAYSVVALILLVISLAMVIAVFILDATQEYDIADALHHVFLLLPSYALPKAVMDIGLNKQRRDSCNIDASAKRECVRFNLKYRDDTFDMEGPGIGTHCLFMFLECIVYFLIVILIEEGFFLGKC-------FGGGRSTTFSVNAREDMDVQEERKKIHNMAQENIKNS---ALVVKNLTKVYRSSGMMAVDHLCFEVPKKECFGLLGVNGAGKTTTFGMLTGELGITDGTAFLDGFNIQSHLKDVQQRLGYCPQFDALIEKMTGREMLRMFARLRGCPPHKLENVVDEAIAQLNLGKWADKM---CGDYSGGNKRKLSTAIALVGDPPIVFLDEPTSGMDPASRRFLWNTLSGVLNSGRSIVLTSHSMEECEALCTRLVIMVNGQLKCIGSIQHLKSRYGQGY--TLMMKIGSSNPQQQQAQNDTIYDGPKAEHQNGVTNQAYSGDNVDKLQPPQNNPLHRVPSAQTIADNTTKAMTFIQETFPGAYLIE---QRQGYVQYQIYNPELRWSQIFGALEERVRDFGVVDYSVSQTSLEQVFINFAKE 853
            F+ +A  +  A  I  +V EK ++ K    + G+ +   W + F    I  LV A ++ ++    NL  ++ +   +F+ L +FA   +   +++S +F+ + +A +   +I   + L  V+ V    A Q+Y +   L     LL   A         L +++      D         F     +D F++      T    M  +  +Y ++   IE   F G+        F   +S  F   + E       +K+I  +  E         + ++NL KVYR    +AVD L     + +    LG NGAGKTTT  +LTG    T GTA++ G +I+S +  ++Q LG CPQ + L + +T  E +  +ARL+G     ++  +++    L++G  + K+       SGG +RKLS A+A VG   +V LDEPT+G+DP SRR +W  L      GR+I+L++H M+E + L  R+ I+ +G+L C+GS   LK++ G GY  TL+ K   S+    +  + T+    K +  +  ++ A  G + +               + T+  + +     I++    A L+E       YV       E  + ++F  +++R+ D G+  Y +S+T+LE++F+  A+E
Sbjct:  643 FMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYS-DPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCV----AWQDY-VGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDN-------LFESPVEEDGFNLT-----TSVSMMLFDTFLYGVMTWYIE-AVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKRISEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ--MALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLK-YRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHE---------------SDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE 1254          
The following BLAST results are available for this feature:
BLAST of TCONS_00060375-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCA11.278e-15239.50ATP-binding cassette sub-family A member 1 OS=Homo... [more]
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