TCONS_00060371-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060371-protein
Unique NameTCONS_00060371-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length936

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060371-protein ID=TCONS_00060371-protein|Name=TCONS_00060371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=936bp
MAYVFRKLRLLIWKNFILQIRRPIGTCVELLLPVALLALLILARENVEDK
NVCMSTYDDVSVDPTPGIKELAFERKTSHFHLAYYPMTAQVLSILQPVAS
KINVTLTKETKSGNVFTSKDNMLDTVKQATDYYLGAITFDNVEDGQPLPK
NVKYSIRLHHSTPKKLGDNRRDSWQTQFVYPFFQAKGPSGNDLYEKIFMP
LQYLIDSSIIQQQTGNPSTSAPSHVRHFPYPNYREDTFITIISSTMPTIF
ILAFIYTAVMIVKELVAEKQSRLKESMKMMGLANWMHWAAWFVKVMVFFL
IVIILQTILLKVGRIFEFADASVVFFFLLFYTLASTFSLFFLSTLFSNAI
RGMLFAAVLWFGTLTPFFAIQDPQQYESLSNGAKFGCCLLPNTCLGIAIQ
IISRKESSQVGIRWNTVSQAPSVDDDFSLGNCFGVLIFDCFLFGFLTWYI
ENVFPGEFGLPKPFYFFLTPSYWCGSPNHRPGSVTDMNGSKSKGPNFEDE
PEGGEIGVSIQDLRKVYKGATGKKVAVDSLSLNIYKGQITALLGHNGAGK
TTTMSILTGLFPPTAGTAYINGNSILSNMDTIRESLGLCPQHNVLFDRLT
VQEHLEFFTALKGIPIAKARPEIMQMIQDIQLFDKANSQSHTLSGGMKRK
LNCAIALIGGSETIFLDEPTSGMDPYARRATWDLLQKYRANKTIILTTHF
MDEADYLGDRIAIMADGELRCCGSSMFLKKRYGVGYHMTIVKSPEFDETK
TCSLVNTTIPSAKMVGNLGAEMSYILEESSTKQFKGLFEQLEDNREAYGI
TSFGVSVTTLEEVFLKVGEGESLSGLQDETDGQGDREKLQPQRQDTFMDR
DTLLSGCALFISQFKAMFIKRFLNSKRQKTAAITQIVLPIFLVVCGLALM
SSSNVDEDDRSRELTLSMLKEKEATLTTFFADFRPG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037989XLOC_037989Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060371TCONS_00060371Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 536..725
e-value: 1.6E-10
score: 51.0
NoneNo IPR availableGENE3D3.40.50.300coord: 507..799
e-value: 3.1E-66
score: 223.4
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 28..448
e-value: 1.0E-26
score: 93.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..503
NoneNo IPR availableCDDcd03263ABC_subfamily_Acoord: 508..729
e-value: 1.49142E-114
score: 351.422
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 528..671
e-value: 6.9E-27
score: 94.5
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 508..741
score: 19.535
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 514..723

Blast
BLAST of TCONS_00060371-protein vs. Swiss-Prot (Human)
Match: ABCA3 (ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3 PE=1 SV=2)

HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 378/976 (38.73%), Postives = 550/976 (56.35%), Query Frame = 0
Query:    4 VFRKLRLLIWKNFILQIRRPIGTCVELLLPVALLALLILARENVEDKNVCMSTYDDVSVDPTPGIKEL----AFERKTSHFHLAYYPMTAQVLSILQPVASKINVTLTKETKSGNVFTSKDNMLDTVK--QATDYYLGAITFDNV--EDGQPLPKNVKYSIRLHHSTPKKLGDN-------RRDSWQTQFVYPFFQAKGP-------SGNDLY-EKIFMPLQYLIDSSIIQQQTGNPSTSAPSH----VRHFPYPNYREDTFITIISSTMPTIFILAFIYTAVMIVKELVAEKQSRLKESMKMMGLANWMHWAAWFVKVMVFFLIVIILQTILLKVG-----RIFEFADASVVFFFLLFYTLASTFSLFFLSTLFSNAIRGMLFAAVLWFGTLTPFFAIQDPQQYESLSNGAKFGCCLLPNTCLGIAIQIISRKESSQVGIRWNTVSQAPSVDDDFSLGNCFGVLIFDCFLFGFLTWYIENVFPGEFGLPKPFYFFLTPSYWCGSPNHRPG-SVTDMNGSKS-KGPNFEDEPEGGEIGVSIQDLRKVYKGATGKKVAVDSLSLNIYKGQITALLGHNGAGKTTTMSILTGLFPPTAGTAYINGNSILSNMDTIRESLGLCPQHNVLFDRLTVQEHLEFFTALKGIPIAKARPEIMQMIQDIQLFDKANSQSHTLSGGMKRKLNCAIALIGGSETIFLDEPTSGMDPYARRATWDLLQKYRANKTIILTTHFMDEADYLGDRIAIMADGELRCCGSSMFLKKRYGVGYHMTIVKSPEFDETKTCSLVNTTIPSAKMVGNLGAEMSYILEESSTKQFKGLFEQLEDNREAYGITSFGVSVTTLEEVFLKVGE-----------------------------GESLSGLQDETDGQGDREKLQPQRQDTFMDRDTLLSGCALFISQFKAMFIKRFLNSKRQKTAAITQIVLPIFLVVCGLALMSSSNVDEDDRSRELTL 916
            V R+L LL+WKN+ LQ R+ + T +EL LP+    +LI  R  ++ +NV      + ++ P   I+EL     F      + LAY P  +      + V   +   L    +    F S+ +  D ++    +   L A+ F++      +PLP  VKY +R  ++    +            + W T  ++P F   GP        G   Y  + F+ +Q+ +D +I++      +          ++ FPYP +  D F+  I   +P + +L+F YTA+ I + +V EK+ RLKE M+MMGL++W+HW+AWF+   +F LI     T+L  V       +   +D S+V  FLL + +++    F +ST FS A     F   L+F T  P+F +     + +LS   K   CLL N  + +  Q+I + E+  +GI+W  +    +VDDDF  G   G+L+ D  L+G +TWY+E VFPG+FG+P+P+YFF+ PSYWCG P    G    D +  K+ +   FE EPE    G+ I+ L KV++     + AV  L+LN+Y+GQIT LLGHNGAGKTTT+S+LTGLFPPT+G AYI+G  I  +M  IR+SLGLCPQH++LFD LTV EHL F+  LKG+   K   E+ QM+  I L DK NS+S  LSGGM+RKL+  IALI GS+ + LDEPTSGMD  +RRA WDLLQ+ ++++TI+LTTHFMDEAD LGDRIAIMA GEL+CCGSS+FLK++YG GYHMT+VK P  +      LV+  +P+A +  + GAE+S+IL   ST +F+GLF +LE  ++  GI SFG S+TT+EEVFL+VG+                               +L G  D +DG G    ++ +R    ++     +G AL   QF AMF+K+   S R+      Q+++P+  V   L  ++ S+   DD    LTL
Sbjct:    3 VLRQLALLLWKNYTLQKRKVLVTVLELFLPLLFSGILIWLRLKIQSENV-----PNATIYPGQSIQELPLFFTFPPPGDTWELAYIPSHSDAA---KTVTETVRRALVINMRVRG-FPSEKDFEDYIRYDNCSSSVLAAVVFEHPFNHSKEPLPLAVKYHLRFSYTRRNYMWTQTGSFFLKETEGWHTTSLFPLFPNPGPREPTSPDGGEPGYIREGFLAVQHAVDRAIMEYHADAATRQLFQRLTVTIKRFPYPPFIADPFLVAIQYQLPLLLLLSFTYTALTIARAVVQEKERRLKEYMRMMGLSSWLHWSAWFLLFFLFLLIAASFMTLLFCVKVKPNVAVLSRSDPSLVLAFLLCFAISTISFSFMVSTFFSKANMAAAFGGFLYFFTYIPYFFVAPRYNWMTLSQ--KLCSCLLSNVAMAMGAQLIGKFEAKGMGIQWRDLLSPVNVDDDFCFGQVLGMLLLDSVLYGLVTWYMEAVFPGQFGVPQPWYFFIMPSYWCGKPRAVAGKEEEDSDPEKALRNEYFEAEPEDLVAGIKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQMLHIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQRQKSDRTIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEDISQLVHHHVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASFGASITTMEEVFLRVGKLVDSSMDIQAIQLPALQYQHERRASDWAVDSNLCGAMDPSDGIG--ALIEEERTAVKLN-----TGLALHCQQFWAMFLKKAAYSWREWKMVAAQVLVPLTCVTLALLAINYSSELFDDPMLRLTL 960          

HSP 2 Score: 207.223 bits (526), Expect = 9.748e-55
Identity = 127/331 (38.37%), Postives = 182/331 (54.98%), Query Frame = 0
Query:  510 IQDLRKVYKGATGKKVAVDSLSLNIYKGQITALLGHNGAGKTTTMSILTGLFPPTAGTAYINGNSILSNMDTIRESLGLCPQHNVLFDRLTVQEHLEFFTALKGIPIAKARPEIMQMIQDIQLFDKANSQSHTLSGGMKRKLNCAIALIGGSETIFLDEPTSGMDPYARRATWDLLQKYR-ANKTIILTTHFMDEADYLGDRIAIMADGELRCCGSSMFLKKRYGVGYHMTIVKSPE-----FDETKTCSLVNTTIPSAKMVGNLGAEMSYILEESSTKQFKGLFEQLEDNREAYGITSFGVSVTTLEEVFLKVGEGESLSGLQDETDGQG 834
            I++L KVY+      +AVD LSL + KG+   LLG NGAGKTTT  +LTG    T+G A++ G+ I S++  +R+ +G CPQ + L D +T +E L  +  L+GIP       +   ++ + L   AN    T SGG KRKL+  IALIG    IFLDEP++GMDP ARR  WD + + R + K II+T+H M+E + L  R+AIM  G+ +C GS   LK ++G GY +      E      +E K  + V+ T P + +       + Y L        K +F  LE  +E YG+  + VS  +LE+VFL      S + LQ  T  +G
Sbjct: 1383 IKELSKVYEQRV-PLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKVQSEGQQEALEEFK--AFVDLTFPGSVLEDEHQGMVHYHLPGRDLSWAK-VFGILEKAKEKYGVDDYSVSQISLEQVFL------SFAHLQPPTAEEG 1703          
The following BLAST results are available for this feature:
BLAST of TCONS_00060371-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCA39.748e-5538.73ATP-binding cassette sub-family A member 3 OS=Homo... [more]
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