TCONS_00060180-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060180-protein
Unique NameTCONS_00060180-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060180-protein ID=TCONS_00060180-protein|Name=TCONS_00060180-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
LVYFPTAACLIAVNYTGCDNTSLSVALMVMSLCFLALNQGAVTVNQMDIS
PRYCSILVGMTNTSASLAGCLSPWVIGYFTNGNPTREQYRKVFFCAASVA
TAGGLFCIIFMSGKVQPWNDMNEEKEGESPSGNTACGKSINVSDECDGYD
ETEHLVRS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037856XLOC_037856Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060180TCONS_00060180Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..129
e-value: 8.1E-10
score: 37.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..158
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 4..112

Blast
[Close]
BLAST of TCONS_00060180-protein vs. Swiss-Prot (Human)
Match: VGLU2 (Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.203e-19
Identity = 43/120 (35.83%), Postives = 69/120 (57.50%), Query Frame = 0 
Query:    7 AACLIAVNYTGCDNTSLSVALMVMSLCFLALNQGAVTVNQMDISPRYCSILVGMTNTSASLAGCLSPWVIGYFTNGNPTREQYRKVFFCAASVATAGGLFCIIFMSGKVQPWNDMNEEKE 126
            A  L+ V Y+      ++++ +V+++ F         VN +DI+PRY SIL+G++N   +L+G + P ++G  T  N +RE+++ VF  AA V   G +F  IF SG+ QPW D  E  E
Sbjct:  397 ATLLLVVGYS--HTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTK-NKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPWADPEETSE 513
The following BLAST results are available for this feature:
BLAST of TCONS_00060180-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VGLU21.203e-1935.83Vesicular glutamate transporter 2 OS=Homo sapiens ... [more]
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