TCONS_00059963-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059963-protein
Unique NameTCONS_00059963-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059963-protein ID=TCONS_00059963-protein|Name=TCONS_00059963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MASRSRKNSRNLNLNVRKSSYVFEYRITFLGAERVGKSAIINQFVEKDFL
RHYQPTAEDHLTHVVEHRGNMCVCLLVDTAGSDDFPAMRKLSVTKGNAFI
VTYSINDRKSYERAKKFIDEIKEVKEKSAEVKIVLVGNKNDLESDRQVPY
TEALSFAANLHEGNVITAFVESSAKDYESVTEIIQKLLNMFIPPPPLIEV
PVLKDDKRKLSLSKKLRASYRRTSAKQTLNRQLSAPVSIDTNNNNESFSD
SEVTPVTPMSPESNRIITSQKRGRADSTPIVKVPQLLFEQSSSPESTXDR
QSPAITFRTKFISRINQYTETFPTISFPPNIVTFTPDVYTRNW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037719XLOC_037719Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059963TCONS_00059963Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 25..46
score: 30.44
coord: 65..87
score: 28.7
coord: 129..142
score: 51.88
coord: 169..191
score: 27.46
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 22..194
e-value: 2.1E-44
score: 163.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 27..190
e-value: 1.8E-7
score: -22.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 25..194
e-value: 2.1E-9
score: 7.7
NoneNo IPR availableGENE3D3.30.70.1390coord: 23..87
e-value: 3.4E-12
score: 45.7
NoneNo IPR availableGENE3D3.40.50.300coord: 88..192
e-value: 6.6E-21
score: 73.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 25..187
e-value: 5.2E-23
score: 79.6
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 27..189
e-value: 8.8E-38
score: 129.3
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 17..268
score: 20.84
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..214

Blast
[Close]
BLAST of TCONS_00059963-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.400e-34
Identity = 67/167 (40.12%), Postives = 99/167 (59.28%), Query Frame = 0 
Query:   24 EYRITFLGAERVGKSAIINQFVEKDFLRHYQPTAEDHLTHVVEHRGNMCVCLLVDTAGSDDFPAMRKLSVTKGNAFIVTYSINDRKSYERAKKFIDEIKEVKEKSAEVKIVLVGNKNDLESDRQVPYTEALSFAANLHEGNVITAFVESSAKDYESVTEIIQKLLNM 190
            +YR+   GA  VGKS+++ +FV+  F   Y PT ED    V+    ++C   + DT GS  FPAM++LS++KG+AFI+ YSI  R+S E  K   ++I E+K     + I+LVGNK D    R+V  +EA + A          AF+E+SAK   +V E+ Q+LLN+
Sbjct:    7 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWK-----CAFMETSAKLNHNVKELFQELLNL 168
The following BLAST results are available for this feature:
BLAST of TCONS_00059963-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA21.400e-3440.12GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
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