TCONS_00059787-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059787-protein
Unique NameTCONS_00059787-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1061

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059787-protein ID=TCONS_00059787-protein|Name=TCONS_00059787-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1061bp
MIWTSILICFTISLVTANDPPTVGWAGPSYTTRKEGESFEFFCNSGSKPT
PKVTWIKDGAELDTSQSTIYIPDGNKLKIPKVTSEVAGKYRCKVENEFGS
NILGWDLNLIVPYMEDVFAYTPRNNFFYASKRQAWANCAAPKGSPRPLIT
FINGTSGKPINTDEARIETRMFSRGDMLLYQMLVKDATDYDTHTKWACKA
SSAAGDKYSYFKVEFYKAPAAPSNIKFTDRLEGFILNWDFIRNDISHYHF
RLTTSDNKVLEYKMKETTEHEIYITKYEIRNLERGKTYKVEMRAVDKDGQ
IGEWSNPINYKTVTEIAPYLDYPLPLKTPVAEGVKHIVKCQIRGEPIPKI
VWTLNGKQISESNSDYEMVNDKGELILVKPVRDRLNGIYQCQGTNKLGSI
KNNPTTLDVEWIEKKFEFSPRNHTFYRGLRFIRISCRPPKSSPAADVDWL
WNDRKINPFTISNFAKVVYNDPLGVLYHALEIRKPTSALAGNYSCVAKNV
GGTQFANLTVKEILPKKPLAISDPKSLTQLFADKEESFKLSCHFLADPTP
SIVWYHNKQKINMENNPYFSVTDDGKGLSTLTLKSLNKIHHGDYYCTATN
EHGTTTTTNGFIDLIYMDPDFVYWQKETYVYDKPGYKHANIICRPPKGNP
STRVVWSNGTEDNLQYQSNPDQTWITNDLENGNFVMKIDNAVKYVGYGLV
GCAAWNHKIGFAGKYNLQLTKLVKVGAPKIESTKVTFESATAMKVTVKLE
KERYDAEFTITVTGKKDSTGNVRRRRRNTDEVIYTNKTKSLENTVEADMW
RFSDIKVQVTASDPAEQKTEAIMEVPDSDIPPKPTTTTPKPTTTTTPEPT
TTTTEPPTTMTTQAPTTTTTPEPTTTTTKAPTTTTTQAETTAKATEKTVE
ITTKATTTEKAKETTESATTTTTTTQSATSSTESLKTTEQSMTTTTTQST
TSTTEAEPTTESEVKKVDPVTTVKSTELTEKATETTEKATESTEKTTEST
EKATETTEKPTQTTEKTTEKSSSSTENPKTTTLADTTTATEETDEKVATT
NKNGVVSVATX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037614XLOC_037614Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059787TCONS_00059787Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 28..112
e-value: 1.0E-6
score: 38.3
coord: 325..410
e-value: 0.028
score: 23.6
coord: 527..617
e-value: 0.0042
score: 26.3
coord: 420..511
e-value: 3.3
score: 15.6
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 533..603
e-value: 3.8E-7
score: 39.7
coord: 34..99
e-value: 5.6E-9
score: 45.8
coord: 331..398
e-value: 0.01
score: 25.0
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 219..302
e-value: 3.3E-4
score: 30.0
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 221..315
score: 11.472
IPR003961Fibronectin type IIICDDcd00063FN3coord: 219..312
e-value: 5.28764E-6
score: 44.7947
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 209..313
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 11..107
e-value: 7.8E-16
score: 57.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 417..511
e-value: 2.3E-8
score: 33.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 319..416
e-value: 5.8E-12
score: 45.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 516..619
e-value: 2.3E-16
score: 59.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 223..318
e-value: 6.1E-12
score: 45.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 113..222
e-value: 0.0031
score: 16.9
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 31..101
e-value: 4.1E-12
score: 45.9
coord: 329..401
e-value: 2.6E-8
score: 33.7
coord: 528..608
e-value: 2.5E-11
score: 43.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 21..96
score: 11.497
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 318..408
score: 9.555
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 414..509
score: 7.032
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 518..607
score: 10.263
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 317..410
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 419..512
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 530..608
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 26..101
NoneNo IPR availableCDDcd00096Igcoord: 432..509
e-value: 4.69228E-4
score: 38.6243
NoneNo IPR availableCDDcd00096Igcoord: 539..603
e-value: 9.18455E-10
score: 55.5731

Blast
[Close]
BLAST of TCONS_00059787-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 2.947e-17
Identity = 140/622 (22.51%), Postives = 257/622 (41.32%), Query Frame = 0 
Query:   20 PPTVGWAGPSYTTRKEGESFEFFCNSGSKPTPKVTWIKDGA-ELDTSQSTIYIPDGNKLKIPKVTSEVAGKYRCKVENEFGSNILGWD---LNLIV---PYMEDVFAYTPRNNFF---YASKRQAWANCAAPKGSPRPLITFINGTSGKPINTDEARIETRMFSRGDMLLYQMLVKDATDYDTHTKWACKASSAAGDKYSYFKVEFYKAPAAPSNIKFTDRLEGFILNWDFIRNDISHYHFRLTTSDNKVLEYKMKETTEHEIYITKYE-IRNLERGKTYKVEMRAVDKDGQIGEWS-NPIN-------YKTVTEIAP--YLDYPLPLKTPVAEGVKHIVKCQIRGEPIPKIVWTLNGKQISESNSDYEMVNDKGELILVKPVRDRLNGIYQCQGTNKLG--------------SIKNNPTTLDVEWIEKKFEFSPRNHTFYRGLRFIRISCRPPKSSPAADVDWLWNDRKINPFTISNFAKVVYNDPLGVLYHALEIRKPTSALAGNYSCVAKNVGGTQFANLTVKEILPKKPLA---ISDPKSLTQLFADKEESFKLSCHFLADPTPSIVWYHNKQKINMENNPYFSVTDDGKGLSTLTLKSLNKIHHGDYYCTATNEHG 603
            PP +   GP +   + G+  +  CN+   P P +TW K G+  L   +  +  PDG  L I + T   AG Y C       +NI G D   + L V   P +ED+    P N  F    A++R  +  C A KG+P+P I +++  +G+ +   E  I   +   G +L    ++   T YD + ++ C A + AG     + ++ +  P     IK  ++    + N   + N +++    +  + + ++ +      +  + +T+   I+ +  GK  K+  RA  +D   G +S   IN       Y  +  + P   +    P +  V       ++CQ++G P P I W  +GK +   + + E++ D+G+++ +K  R    G YQC  +N  G              SIK    T D+  +                   I++ C   +  P   + W  + +      I + ++ +Y D        L I +   + +  Y+C   NV GT   +  V   +P  P+    ++ P +   + A    S  L C    +P+P + W   K  + ++ N    +   GK L  ++ + +++   G Y C AT+  G
Sbjct: 1170 PPKI-QRGPKHLKVQVGQRVDIPCNAQGTPLPVITWSKGGSTMLVDGEHHVSNPDGT-LSIDQATPSDAGIYTC-----VATNIAGTDETEITLHVQEPPTVEDL--EPPYNTTFQERVANQRIEFP-CPA-KGTPKPTIKWLH--NGRELTGREPGIS--ILEDGTLL----VIASVTPYD-NGEYICVAVNEAGTTERKYNLKVHVPPV----IKDKEQ----VTNVSVLLNQLTNLFCEVEGTPSPIIMWY-----KDNVQVTESSTIQTVNNGKILKL-FRATPEDA--GRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPNEVSVVLNRDVALECQVKGTPFPDIHWFKDGKPLFLGDPNVELL-DRGQVLHLKNARRNDKGRYQCTVSNAAGKQAKDIKLTIYIPPSIKGGNVTTDISVLINS---------------LIKLECE-TRGLPMPAITWYKDGQP-----IMSSSQALYIDK----GQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVDVYVP--PMIEGNLATPLNKQVVIA---HSLTLECKAAGNPSPILTWL--KDGVPVKANDNIRIEAGGKKLEIMSAQEIDR---GQYICVATSVAG 1719
The following BLAST results are available for this feature:
BLAST of TCONS_00059787-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.947e-1722.51Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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