TCONS_00059424-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059424-protein
Unique NameTCONS_00059424-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length974

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059424-protein ID=TCONS_00059424-protein|Name=TCONS_00059424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=974bp
MPVFHTKTIESILEPVANQVSQLIVIHDQLGEGQYIIAHNLADNVKNVSA
AVNNLVQAGKDTVAKANDDIFRREMPPTFVKVEQASSALVESTQLLTQDV
QSKRGQALLISGARGILNGTSALLLTFDDHEVRKILKKCRNVLDYIPVAE
VVESLPDTVTYIKNLSPGLLQMAKAVDNRIPDLTHVTHAELLQKHVASVK
ELATNLPNSMRAYIAASQKNVGRAEAQENRNFIVGKMCDDIIEIMRVLQL
KVDDEYDLEDPTNLMRKAQHRMVEKMKLAKEWLANPDGEANGLGERAIRD
IIKQARQVGMLANDQKIKDLCDDLDGLVDKLSALRAKGMGNTPEALALAK
EIDGKLEILAKLVDDAIKREVAAGNRLPAATTSGQFEQALNWIDDPRYNP
NSVGKRAIDALLADGRRLAENLSGPEKQELLDTMANIERLTKQLEDLKRA
GKGNTPEAQRIAAELKRELEKLKGILQRGAVRGVVDNFKDILSPIKQLAK
AAKAPVDTPNREQDFEEKAGAFEYHTSKMVDSAEQTAIHGKHATKQLVDN
IHTATKELAELTPQVSHAGKLLLLNPGDKVIEANFDMLKQKWENKAEEVM
GLVDAATDAADFVKATEDAMRAEQKVAFDGLQKENPAVVVAKGGNMARMG
NRVAQVANAEAENSEDPEFKHAVSSAAVGVSDSIKPLVASTKNVALNPRH
QPIQIEFKQTSEGLIGRVVDVRNALEPPPPREPTPPPPPPPAPELDFEVP
DISDIKLQDEGPARPPPPVVEGIINADESRELHSMLESAPDADNRMAFAA
HQLHVEANKWEEDGNELIQLARQMALLFAKMSKFITDEEYFLTQPKKMLI
DTAKQIAKVSSEFSKKAREISHQCPDKRMKHDLNLTIDRIPTISTQLKIL
ATVKATMFGANDPQADFEATEMLVGCAENLMGSARSVVKDCEAASIKIRT
GAGKVQRWKRDTSALYSYQLDKRY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037407XLOC_037407Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059424TCONS_00059424Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006077Vinculin/catenin
Vocabulary: Biological Process
TermDefinition
GO:0007155cell adhesion
Vocabulary: Molecular Function
TermDefinition
GO:0051015actin filament binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007155 cell adhesion
molecular_function GO:0051015 actin filament binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 317..337
NoneNo IPR availableCOILSCoilCoilcoord: 427..450
NoneNo IPR availablePRINTSPR00806VINCULINcoord: 869..884
score: 36.61
coord: 758..768
score: 44.16
coord: 815..832
score: 50.0
coord: 923..942
score: 47.14
coord: 888..909
score: 83.12
NoneNo IPR availableGENE3D1.20.120.230coord: 1..130
e-value: 1.8E-13
score: 50.3
NoneNo IPR availableGENE3D1.20.120.230coord: 309..471
e-value: 0.0059
score: 16.3
NoneNo IPR availableGENE3D1.20.120.230coord: 777..964
e-value: 2.2E-32
score: 111.6
NoneNo IPR availableGENE3D1.20.120.230coord: 132..256
e-value: 3.5E-17
score: 62.2
coord: 481..610
e-value: 1.9E-18
score: 66.3
NoneNo IPR availableGENE3D1.20.120.230coord: 611..725
e-value: 7.0E-16
score: 58.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..747
IPR006077Vinculin/alpha-cateninPFAMPF01044Vinculincoord: 3..962
e-value: 9.8E-251
score: 834.9
IPR006077Vinculin/alpha-cateninSUPERFAMILY47220alpha-catenin/vinculin-likecoord: 379..534
IPR006077Vinculin/alpha-cateninSUPERFAMILY47220alpha-catenin/vinculin-likecoord: 44..249
IPR006077Vinculin/alpha-cateninSUPERFAMILY47220alpha-catenin/vinculin-likecoord: 610..741
IPR006077Vinculin/alpha-cateninSUPERFAMILY47220alpha-catenin/vinculin-likecoord: 259..367
IPR006077Vinculin/alpha-cateninSUPERFAMILY47220alpha-catenin/vinculin-likecoord: 787..960
IPR006077Vinculin/alpha-cateninSUPERFAMILY47220alpha-catenin/vinculin-likecoord: 539..608

Blast
BLAST of TCONS_00059424-protein vs. Swiss-Prot (Human)
Match: VINC (Vinculin OS=Homo sapiens GN=VCL PE=1 SV=4)

HSP 1 Score: 402.134 bits (1032), Expect = 4.298e-123
Identity = 278/771 (36.06%), Postives = 412/771 (53.44%), Query Frame = 0
Query:  265 MRKAQHRMVEKMKLAKEWLANPDGEANGLGERAIRDIIKQARQVGMLANDQKIKD----LCDDLDGLVDKLSALRAKGMGNTPEALALAKEIDGKLEILAKLVDDAIKREVAAGNRLPAATT---SGQFEQALNWIDDPRYNPNSVGKRAIDALLADGRRLAENLSGPEKQELLDTMANIERLTKQLEDLKRAGKGNTPEAQRIAAELKRELEKLKGILQRGAVRGVVDNFKDILSPIKQLAKAAKAPVDTPNREQDFEEKAGAFEYHTSKMVDSAEQTAIHGKHATKQLVDNIHTATKELAELTPQVSHAGKLLLLNPGDKVIEANFDMLKQKWENKAEEVMGLVDAATDAADFVKATEDAMRAE---QKVAFDGLQKENPAVVVAKGGNMARMGNRVAQVANAEAENSEDPEFKHAVSSAAVGVSDSIKPLVASTKNVALNPRHQPIQIEFKQTSEGLIGRVVDVRNA--------------LEPPPPREPTPPPPPP------------------------PAPELDFEVPDISDIKLQDEG------PARPPPPVVEGII---------------NADESRELHSMLESAPDADNRMAFAAHQ-LHVEANKWEEDGNELIQLARQMALLFAKMSKFITDEEYFLTQPKKMLIDTAKQIAKVSSEFSKKAREISHQCPDKRMKHDLNLTIDRIPTISTQLKILATVKATMFG---ANDPQADFEATEMLVGCAENLMGSARSVVKDCEAASIKIRTGAGKVQRWKRDT 962
            M  ++  + +K+  A+ WLA+P+G   G  E  IR  + +AR++  L +D K +D       ++  L  KL+ LR +G G++PEA ALAK++   L+ L    + A+       N  PA       G+ EQA  WID+P  +   VG+ AI  L+A+G RLA  + GP +Q+LL     +++LT QL DL   G+G +P+A+ +A++L+  L+ LK  +Q    + V D F D  +PIK LA AA AP D PNRE+ F+E+A  FE H+ K+  +AE+ A  G  A K  V+ I  + K   ELTPQV  A ++LL NPG++    +F+ +K +W +  E++ GLVD A D    + A+E+A++ +    KVA   +Q   P ++VA   ++AR  NR+  VA  E ENSEDP+F+ AV +A+  +S +I P+V   K VA N     +Q  F  +   ++G V  VR A              LE     +   PP PP                         A E+  +   ++  +L DE       P  P   V  G++               + ++  E   +L  +    N+   AA Q LH EA KW   GN++I  A++MALL A+MS+ +       +  K+ LI  AK IAK S E ++ A+E++ QC DKR++ +L    +RIPTISTQLKIL+TVKATM G    +D +++ +ATEMLV  A+NLM S +  V++ EAASIKIRT AG   RW R T
Sbjct:  377 MTNSKQSIAKKIDAAQNWLADPNGGPEG--EEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV------ANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGT-ANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQ---PQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARKWSSKPGIPAAEVGIGVVAEADAADAAGFPVPPDMEDDYEPELLLMPSNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGG----SGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESE-QATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKT 1130          

HSP 2 Score: 335.495 bits (859), Expect = 9.372e-99
Identity = 198/480 (41.25%), Postives = 301/480 (62.71%), Query Frame = 0
Query:    1 MPVFHTKTIESILEPVANQVSQLIVIHDQLGEGQYIIAHNLADNVKNVSAAVNNLVQAGKDTVAKANDDIFRREMPPTFVKVEQASSALVESTQLLTQDVQSKRGQALLISGARGILNGTSALLLTFDDHEVRKILKKCRNVLDYIPVAEVVESLPDTVTYIKNLSPGLLQMAKAVDNRIPDLTHVTHAELLQKHVASVKELATNLPNSMRAYIAA-SQKNVGRAEAQENRNFIVGKMCDDIIEIMRVLQLKVDDE--YDLEDPTNLMRKAQHRMVEKMKLAKEWLANPDGEANGLGERAIRDIIKQARQVGMLANDQKIKDL---CDDLDGLVDKLSALRAKGMGNTPEALALAKEIDGKLEILAKLVDDAIKREVAAGNRLPAATTSGQFEQALNWIDDPRYNPNSVGKRAIDALLADGRRLAENLSGP-EKQELLDTMANIERLTKQLEDLKRAGKGNTPEAQRIAAELKRELEKLK 473
            MPVFHT+TIESILEPVA Q+S L+++H++ GE       +L   V  V AAV+NLV+ GK+TV    D I +R+MPP F+KVE A + LV++ Q+L  D  S   +  LI G+RGIL+GTS LLLTFD+ EVRKI++ C+ +L+Y+ VAEVVE++ D VTY KNL PG+ +MAK +D R  +LTH  H  +L   + +VKEL   L ++M+ ++   + KN G  EA +NRNF V KM  +I EI+RVLQL   DE  +  +D T  M++A   +  K+  AK WL +P       GE+AIR I+ +A +VG L   ++ +++   C  L  + D+++ LRA+G G++P A+  A+++   L++L   V++A ++  A  N     + + + + A NW+ DP   P   G+  I   LA+ R++AE    P E+ ++L ++  I  LT +L DL+R GKG++PEA+ +A ++   L+ L+
Sbjct:    1 MPVFHTRTIESILEPVAQQISHLVIMHEE-GEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD-TEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTN--SKQSIAKKIDAAQNWLADPNGGPE--GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQ 474          
The following BLAST results are available for this feature:
BLAST of TCONS_00059424-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VINC4.298e-12336.06Vinculin OS=Homo sapiens GN=VCL PE=1 SV=4[more]
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