TCONS_00059235-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059235-protein
Unique NameTCONS_00059235-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length482

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059235-protein ID=TCONS_00059235-protein|Name=TCONS_00059235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=482bp
MEDSELLEDLKCGICLELLVDPTSLSCGHTVCRYCLAQWWVKSRKRICPQ
CRQQWSGFPKVNVTLRNTIVSLYKSQSKEKLDSLKSDPTYDDIMNKFELL
GNVENRNSRNNNSRFSWTGFCILFAIAVGLVVIVSLGFKNMGGLSKESLK
SKALEHWTVHDVGFWVGTLGDWASVYQNNFVNAGINGDLLGLFSNHAELE
DPKINMTVKIHQTKFLNELKILKETLPASSFDIWSYKERKNEMAMFIMLG
VREFPRATVVYLYLFNYWDTFLPFFSACVKHEEDYTTKQLIDLDENPTVN
QWLEFIPWLIIAPYGLIAKFAYNFLEQHYWTSRVVIMHAFFMTLTEFAKY
PGIVSSRDARRVHIKALKYFGFVLISSFFFKIFWSFIPMFIADCIFYWML
YVSPFDAANRLIKRMFRARRVEDHAASDEQVVDDTGTEVHQHQHQHHHQQ
QQQQQQQQQQQQQQAGGSRGWHFNFHWSSHDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037305XLOC_037305Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059235TCONS_00059235Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR001660SAM
IPR017907Znf_RING_CS
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 12..51
e-value: 2.3E-7
score: 40.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 12..52
score: 13.079
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 11..53
e-value: 9.70521E-12
score: 59.3816
NoneNo IPR availableGENE3D1.10.150.50coord: 150..228
e-value: 8.3E-9
score: 35.1
NoneNo IPR availableGENE3D3.30.70.270coord: 375..478
e-value: 4.4E-5
score: 23.0
NoneNo IPR availablePFAMPF15227zf-C3HC4_4coord: 12..51
e-value: 3.5E-10
score: 39.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..465
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..73
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..117
e-value: 2.4E-19
score: 69.1
IPR001660Sterile alpha motif domainPFAMPF07647SAM_2coord: 156..223
e-value: 5.9E-5
score: 23.0
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 157..225
score: 11.108
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 27..36
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 153..224

Blast
[Close]
BLAST of TCONS_00059235-protein vs. Swiss-Prot (Human)
Match: BFAR (Bifunctional apoptosis regulator OS=Homo sapiens GN=BFAR PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.650e-78
Identity = 136/426 (31.92%), Postives = 225/426 (52.82%), Query Frame = 0 
Query:    7 LEDLKCGICLELLVDPTSLSCGHTVCRYCLAQWWVKSRKRICPQCRQQWSGFPKVNVTLRNTIVSLYKSQSKEKLDSLKSDPTYDDIMNKFELLGNVE---NRNSRNNNSRFSWTGFCILFAIAVGLVVIVSLGFKNMGGLSKESLKSKALEHWTVHDVGFWVGTLGDWASVYQNNFVNAGINGDLLGLFSNHAELEDPKINMTVKIHQTKFLNELKILKETLPASSFDIWSYKERKNEMAMFIMLGVREFPRATVVYLYLFNYWDTFLPFFSACVKHEEDYT----TKQLIDLDENPTVNQWLEFIPWLIIAPYGLIAKFAYNFLEQHYWTSRVVIMHAFFMTLTEFAKYPGIVSSRDARRVHIKALKYFGFVLISSFFFKIFWSFIPMFIADCIFYWMLYVSPFDAANRLIKRMFRARRVEDHA 425
            + +  C  C ++LV+PT+L+CGH+ CR+CLA WW  S+K  CP+CR++W GFPKV++ LR+ I  L+    + + + ++ +      +  F+  GN +     N+   N +     F  +     G+ V++ +   +      + L  KA+  WT  +V  W+  LG WAS+Y+  F++  +NG LL L     E       +    H+   L EL+ +K        ++W YK      ++F++  ++  PR +++YLYLF+Y DTFLPF       +ED +      +L+DL E PT  QW EF+      PY LIA+FA+++LE HYWTSR +I++A  +++ E   +  I S  + + V  +   +F  V     F  +FW  IP F+ +C+FYW LY +P    + ++K +   RR+E   
Sbjct:   29 VSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLRFEDIQQNNDIVQSLAAFQKYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLLVYHWSSRESEHDLLVHKAVAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLL-LTLTEEEFSKTPYTIENSSHRRAILMELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIHTICPLQEDSSGEDIVTKLLDLKE-PTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSRFLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCNCLFYWALYFNPIINIDLVVKEL---RRLETQV 449
The following BLAST results are available for this feature:
BLAST of TCONS_00059235-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BFAR1.650e-7831.92Bifunctional apoptosis regulator OS=Homo sapiens G... [more]
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