TCONS_00058828-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058828-protein
Unique NameTCONS_00058828-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length272

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058828-protein ID=TCONS_00058828-protein|Name=TCONS_00058828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
MVCSMNKRRCGVGVSVLDELLYAVGGHDGSSYLNSVERYDPKTNQWSSDV
SPTSTCRTSVGVAVLDGYLYAVGGQDGVSCLNIVERYDSKANSWSRVTPM
SCRRLGVAVSVLDGYLYAIGGSDGTSPLASVERFDPATSTWTSAKQMGTK
RKHLGAAVYQGCIYAVGGRDDATELSSAEKYDAKSNTWIPVVALNSRRSG
VGLSVVNGQLIAVGGFDGTTYLKSIEIYDPTGKQWKLQCGMNYRRLGGGV
GVVTLHQSEGYTWGYFQAGCIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037066XLOC_037066Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058828TCONS_00058828Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 20..67
e-value: 1.6E-14
score: 64.2
coord: 115..161
e-value: 1.3E-12
score: 57.9
coord: 162..208
e-value: 9.6E-13
score: 58.3
coord: 209..255
e-value: 4.6E-9
score: 46.1
coord: 68..114
e-value: 2.3E-13
score: 60.4
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 103..147
e-value: 8.3E-15
score: 54.0
coord: 8..47
e-value: 2.0E-16
score: 59.2
coord: 151..191
e-value: 5.1E-12
score: 45.1
coord: 197..236
e-value: 1.3E-11
score: 43.7
coord: 57..101
e-value: 1.1E-15
score: 56.8
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..118
e-value: 1.7E-30
score: 105.5
coord: 119..270
e-value: 8.4E-34
score: 116.4
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 51..253

Blast
[Close]
BLAST of TCONS_00058828-protein vs. Swiss-Prot (Human)
Match: KLH20 (Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE=1 SV=4)

HSP 1 Score: 418.698 bits (1075), Expect = 1.321e-144
Identity = 198/263 (75.29%), Postives = 226/263 (85.93%), Query Frame = 0 
Query:    1 MVCSMNKRRCGVGVSVLDELLYAVGGHDGSSYLNSVERYDPKTNQWSSDVSPTSTCRTSVGVAVLDGYLYAVGGQDGVSCLNIVERYDSKANSWSRVTPMSCRRLGVAVSVLDGYLYAIGGSDGTSPLASVERFDPATSTWTSAKQMGTKRKHLGAAVYQGCIYAVGGRDDATELSSAEKYDAKSNTWIPVVALNSRRSGVGLSVVNGQLIAVGGFDGTTYLKSIEIYDPTGKQWKLQCGMNYRRLGGGVGVVTLHQSEGYTW 263
            MV SM+KRRCGVGVSVLD+LLYAVGGHDGSSYLNSVERYDPKTNQWSSDV+PTSTCRTSVGVAVL G+LYAVGGQDGVSCLNIVERYD K N W+RV  MS RRLGVAV+VL G+LYA+GGSDGTSPL +VER++P  + W +   MGT+RKHLG AVYQ  IYAVGGRDD TELSSAE+Y+ ++N W PVVA+ SRRSGVGL+VVNGQL+AVGGFDGTTYLK+IE++DP    W+L  GMNYRRLGGGVGV+ +   E + W
Sbjct:  347 MVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVIKMTHCESHIW 609

HSP 2 Score: 154.451 bits (389), Expect = 4.134e-43
Identity = 86/185 (46.49%), Postives = 113/185 (61.08%), Query Frame = 0 
Query:   69 LYAVGGQDGVSCLNIVERYDSKANSWSRVTPMSCRRLGVAVSVLDGYLYAIGGSDGTSPLASVERFDPATSTWTS-AKQMGTKRKHLGAAVYQGCIYAVGGRDDATELSSAEKYDAKSNTWIPVVALNSRRSGVGLSVVNGQLIAVGGFDGTTYLKSIEIYDPTGKQWKLQCGMNYRRLGGGVGV 252
            L+AVGG      ++ VERYD + N W  V  MS RR GV VSVLD  LYA+GG DG+S L SVER+DP T+ W+S      T R  +G AV  G +YAVGG+D  + L+  E+YD K N W  V ++++RR GV ++V+ G L AVGG DGT+ L ++E Y+P   +W     M  RR   G  V
Sbjct:  320 LFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAV 504
The following BLAST results are available for this feature:
BLAST of TCONS_00058828-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH201.321e-14475.29Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE... [more]
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