TCONS_00058580-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058580-protein
Unique NameTCONS_00058580-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058580-protein ID=TCONS_00058580-protein|Name=TCONS_00058580-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MKECILALLLLARICTSCAQDVIEPGSIDPTPNIPPADDHGASQLMSQPM
QSFHQSISPSASQSAMPMSQPMQSFHQSFSPSASQSVMPMSQPMQSFRQS
ISPSASQSVMPMSSAITTAPPTRKVLFQCNFERDACSPASTGDHWERRNG
STPSYDTGPSVDATTGTSAGHYIHYESSNPPSDNIDLLEYILPPTRSHIY
CISFAYHMYGSDIGTLRVGVQNPLPNFFWQMSGNKGDRWHRVQISHLSVT
SPFFPFFQPARLIFEARRPRGWESDFAIDDIVVTERCDDSNTTTTTTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036894XLOC_036894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058580TCONS_00058580Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000998MAM_dom
IPR013320ConA-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000998MAM domainSMARTSM00137MAM_2coord: 124..289
e-value: 3.7E-17
score: 73.0
IPR000998MAM domainPFAMPF00629MAMcoord: 129..287
e-value: 2.3E-28
score: 99.0
IPR000998MAM domainPROSITEPS50060MAM_2coord: 127..289
score: 27.16
IPR000998MAM domainCDDcd06263MAMcoord: 129..285
e-value: 3.20869E-34
score: 122.486
NoneNo IPR availableGENE3D2.60.120.200coord: 124..288
e-value: 8.2E-33
score: 113.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..88
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 127..287

Blast
[Close]
BLAST of TCONS_00058580-protein vs. Swiss-Prot (Human)
Match: MALR1 (MAM and LDL-receptor class A domain-containing protein 1 OS=Homo sapiens GN=MALRD1 PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 5.411e-22
Identity = 60/163 (36.81%), Postives = 84/163 (51.53%), Query Frame = 0 
Query:  127 FQCNFERDACS---PASTGDHWERRNGSTPSYDTGPSVDATTGTSAGHYIHYESSNPPS--DNIDLLEYILPPTRSHIYCISFAYHMYGSDIGTLRVGVQ---NPLPNFFWQMSGNKGDRWHRVQISHLSVTSPFFPFFQPARLIFEARRPRGWESDFAIDDI 281
             QCNFE   C+    A     W R  G TP+ +TGP  D T GT+ GHY++ ESS P +  D+  LL  IL  T +      F YHM+G  I  L +  +   +      WQ+ GN+G+RW R    HL+++S      QP +++ EA    G+  D AIDD+
Sbjct:  863 LQCNFETGICNWEQDAKDDFDWTRSQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQDSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQLLWQIFGNQGNRWIR---KHLNISSR-----QPFQILVEASVGDGFTGDIAIDDL 1017
The following BLAST results are available for this feature:
BLAST of TCONS_00058580-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MALR15.411e-2236.81MAM and LDL-receptor class A domain-containing pro... [more]
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