TCONS_00058514-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058514-protein
Unique Name	TCONS_00058514-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	513

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058514-protein ID=TCONS_00058514-protein|Name=TCONS_00058514-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
KTTTIMAASNMTAKNESEKMDVKRKNSKIIKLKKDSVSESDEESEDDFFD
REKIKKKFMSAWMNVKYGFNVQISKPSFNDQNPVWLLGRCYHIKNTDTED
DGRVVKDEHKVLSLDQFFEDFSSLVWLTYRKKFETLAKSNLTSDGGWGCM
LRSGQMLLANAILIHMLREGWRTSQRATSYEKNYIYRMIVRFFNDEDSDH
SPFSLHELVRVGEASGKKPGDWYGPNSVAHTISHTVNNTSHPTLETLRVY
VAQDCTVYKEDVIKACTRCKNCFNPACQDKFWRSLLXACTHCKNCFNPAC
QDKFWRSLLILVPVRLGSESLNPIYIPCLKALLALDCCVGIIGGRPKHSL
YFVGFQGDKLIHLDPHYLQDKVDMSTRDFPVDSFHCQYPKKMSFEKMDPS
CAIGFYCRTRADFENFCQEAKQVSPPPKQRIEYPMFIFDEGSNPSNVDFD
FVDNSITQGIATVTLNTASNSGQEKDKKKLKKLLKLKRKSKSKEGVGEEG
TEEETVEEYVLVD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036864	XLOC_036864	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058514	TCONS_00058514	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005078	Peptidase_C54

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005078	Peptidase C54	PFAM	PF03416	Peptidase_C54	coord: 115..418 e-value: 2.6E-103 score: 344.9
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 70..437

Blast

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BLAST of TCONS_00058514-protein vs. Swiss-Prot (Human)
Match: ATG4D (Cysteine protease ATG4D OS=Homo sapiens GN=ATG4D PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.205e-104
Identity = 181/435 (41.61%), Postives = 236/435 (54.25%), Query Frame = 0

Query:   38 SESDEESEDDFFDREKIKKKFMSAWMNVKYGFNVQISKPSFNDQNPVWLLGRCYHIKNTDTEDDGRVVKDEHKVLSLDQFFEDFSSLVWLTYRKKFETLAKSNLTSDGGWGCMLRSGQMLLANAILIHMLREGW-------------------------------RTSQRATSYEKNYIYRMIVRFFNDEDSDHSPFSLHELVRVGEASGKKPGDWYGPNSVAHTISHTVNNTSHPTLETLRVYVAQDCTVYKEDVIKACTRCKNCFNPACQDKFWRSLLXACTHCKNCFNPACQDKFWRSLLILVPVRLGSESLNPIYIPCLKALLALDCCVGIIGGRPKHSLYFVGFQGDKLIHLDPHYLQDKVDMSTRDFPVDSFHCQYPKKMSFEKMDPSCAIGFYCRTRADFENFCQEAKQVSPPPKQRIEYPMFIFDEG 441
            S     SE D  D  K K KF++AW NVKYG+ V+ S+ SF+  + + L GR Y  +    E D            + +F  DF S +WLTYR+ F  L    LTSD GWGCMLRSGQM+LA  +L+H L   W                               R +Q A   E+   +R IV +F D     +PF LH LV +G++SGKK GDWYGP+ VAH +   V + S  T   L VYV+QDCTVYK DV +   R     +P  +                          W+S++ILVPVRLG E+LNP+Y+PC+K LL  + C+GI+GG+P+HSLYF+G+Q D L++LDPHY Q  VD+S  DFP++SFHC  P+KM+F KMDPSC +GFY   R +FE  C E  +V         YPMF   EG
Sbjct:   51 SPGAGPSEPDEVD--KFKAKFLTAWNNVKYGWVVK-SRTSFSKISSIHLCGRRYRFEG---EGD------------IQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWAEGMGLGPPELSGSASPSRYHGPARWMPPRWAQGAPELEQERRHRQIVSWFADHP--RAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILRKAVESCSDVT--RLVVYVSQDCTVYKADVARLVARP----DPTAE--------------------------WKSVVILVPVRLGGETLNPVYVPCVKELLRCELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATERYPMFTLAEG 433

The following BLAST results are available for this feature:

BLAST of TCONS_00058514-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058514-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATG4D	1.205e-104	41.61	Cysteine protease ATG4D OS=Homo sapiens GN=ATG4D P...	[more]

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TCONS_00058514-protein (polypeptide) - C. hemisphaerica