TCONS_00057487-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057487-protein
Unique NameTCONS_00057487-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length536

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057487-protein ID=TCONS_00057487-protein|Name=TCONS_00057487-protein|organism=Clytia hemisphaerica|type=polypeptide|length=536bp
MRRFLLLFMICHHAIASEDGDDDMGGMLRHCMEMSGDMGGDMDPCSCFAN
QNTTFLGPFPNGTTNAYFISWINNKPYYSDKKVKGFEGFGVTQSLIHLTL
DEELNKEKVAVADCEGKEEPSKLIEFHNLPKHHYDTQQEIFNLLLETNKT
RLLQKLNMSEDSGDIFIVSATTFDASKNGTLFIKVPVVKSEKSVLIVRTE
DILLLLRFLEGISNCLGVVSFSITVAINLAAIIWFIERNSNPDFQNTFGA
GLWTSFWYCFVTMTTVGYGDKVPKHFISRLLCLAWMLVGLMLTAIITTTV
MEAVQKDYSTGGKDIGVLRHSTELSIVRSQLSGNPKQYNSYEEMYSALLN
KDIDGILMDSNVASVYFNTEKPADLKIESEYMITAQIYAYIYYHKKYSWF
DIEYDDDEIPVAMSRGMIARYVPPYVVVHYYTRSIEEMFNKQDGGLALYT
AIAAGCLVFIGILSEIIVFIKGNSSSKMKRKRQETKKVLSYEMLPQYQKL
QSLEKELHGVIATLKSEMRKAYMDESNGVNNKASEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036228XLOC_036228Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057487TCONS_00057487Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001320Iontro_rcpt
IPR001638Solute-binding_3/MltF_N
IPR013099K_chnl_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 500..520
NoneNo IPR availableGENE3D3.40.190.10coord: 303..388
e-value: 3.3E-8
score: 33.3
NoneNo IPR availableGENE3D1.10.287.70coord: 191..302
e-value: 5.0E-21
score: 74.2
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 214..312
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 309..398
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 223..297
e-value: 6.0E-7
score: 29.3
IPR001638Solute-binding protein family 3/N-terminal domain of MltFPFAMPF00497SBP_bac_3coord: 309..381
e-value: 1.0E-7
score: 31.5
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 229..305
e-value: 1.0E-14
score: 54.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057487-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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