TCONS_00057436-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057436-protein
Unique NameTCONS_00057436-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length300

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057436-protein ID=TCONS_00057436-protein|Name=TCONS_00057436-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MSTFEAVKYFRESLRKDPELSIPLAAIKTLIKIIEVSEEVSLQGLDASLK
TVIKDLENSSDNSITSITSGCELLQRFITLAAPDALLSKDFSECKKVLAM
RGKLFLQQAHNSRNQISKLSQQFIQDGCVILIHARSRVIIHLLVQAAKMN
KKFTVYVTESMPDQQGLETKQILEQHNISCKVILDSSVGFIMERVDMVLL
GAEAVVESGGIINKIGTFQMAVTAKAMNKPVYVAAESFKFLREYPLKQTE
VSNKYKYFKNCENGHPSVDYTPPSYIALLFTDLGVLTPSAVSDELIKLYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036194XLOC_036194Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057436TCONS_00057436Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10470coord: 110..300
e-value: 2.4E-65
score: 219.1
NoneNo IPR availableSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 7..299
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 18..288
e-value: 4.1E-60
score: 203.3

Blast
[Close]
BLAST of TCONS_00057436-protein vs. Swiss-Prot (Human)
Match: EI2BA (Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens GN=EIF2B1 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.434e-101
Identity = 156/310 (50.32%), Postives = 217/310 (70.00%), Query Frame = 0 
Query:    1 MSTFEAVKYFRESLRKDPELSIPLAAIKTLIKIIEVSEEVSLQGLDASLKTVIKDLENSSDNSITSITSGCELLQRFITLAAPDALLSKDFSECKKVLAMRGKLFLQQAHNSRNQISKLSQQFIQDGCVILIHARSRVIIHLLVQAAKMNKKFTVYVTESMPDQQGLETKQILEQHNISCKVILDSSVGFIMERVDMVLLGAEAVVESGGIINKIGTFQMAVTAKAMNKPVYVAAESFKFLREYPLKQTEVSNKYKY----FKNCENG------HPSVDYTPPSYIALLFTDLGVLTPSAVSDELIKLYL 300
            M   E ++YF+  +++DP+++  +AAI+TL++ ++  +  ++QGL A+L + I+ L    D+S+ +++SG EL  RFI+LA+   L   D+S+CKK++  RG+LFL++   SRN+I+ L   FI+DG  IL HA SRV++ +L  A    K+F+VYVTES PD  G +  + L   N+   V+LD++VG+IME+ D+V++GAE VVE+GGIINKIGT QMAV AKA NKP YV AESFKF+R +PL Q +V +K+KY     K  + G      HP VDYT PS I LLFTDLGVLTPSAVSDELIKLYL
Sbjct:    1 MDDKELIEYFKSQMKEDPDMASAVAAIRTLLEFLKRDKGETIQGLRANLTSAIETL-CGVDSSV-AVSSGGELFLRFISLAS---LEYSDYSKCKKIMIERGELFLRRISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKYKADTLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIKLYL 305
The following BLAST results are available for this feature:
BLAST of TCONS_00057436-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EI2BA6.434e-10150.32Translation initiation factor eIF-2B subunit alpha... [more]
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