TCONS_00057298-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057298-protein
Unique NameTCONS_00057298-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057298-protein ID=TCONS_00057298-protein|Name=TCONS_00057298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
SQGTSEILKIENEAFKNLIVLENLKIEKNNFLYFSKALFTGLENLKSLSF
SREQLMVIEPNTFENLSEPVSYDAGNDFRICCCKTGRFMANFGKKLQTSS
ICSMETCSDVISKYCTKYYINTVEWINEPELESSSSVIVSPSQSTSQSSS
KPDSQQTPDHLTSTTSYHQQVKSSEEITPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036103XLOC_036103Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057298TCONS_00057298Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 21..67
e-value: 9.8E-7
score: 28.4
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 3..176
e-value: 4.0E-7
score: 28.4
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 7..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..180

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057298-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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