TCONS_00057149-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057149-protein
Unique NameTCONS_00057149-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length469

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057149-protein ID=TCONS_00057149-protein|Name=TCONS_00057149-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
RFRDLTRDMCTDLPDFTDINTCYSAFQKKLSKIAKRSIPRGFRKNYIPEW
DDTCENLSSQLEEANSLEDKTSLSNQLIDHLDTNRRQRWITTVENVDMKS
SSRRAWSTLNKLTGRKNVLPNPNSMNPNSVASCLLSNGKFKNPNKEFTRD
INRQLKEAWCSPSVDQNLCSEFSTDEMFSAIKTLKAWKAPGVDNLHPEFF
LHMDDTCLDWLRQFFNHCLKTISVPKIWKLSKVVAVLKPKKPPDNPSSYR
PVSLLCIPLKLYERLIYNRIQPITESFLPNKQAGFRPGRSCLDQVALLTE
DIEHAFDQKLKAGIVLVDLSAAYDTVWHRGLTLKLLKTIPSRQIVCAIMS
MISQRRFHVHIGGKKSRCRTLINGVQQGSVITPLLFTIYTHELPPTVSKK
YVYADDLALKSTHKDFPEIEEDLSKDVDSLRTYFTNWRLKLNTGKTVSSV
FHLANRKANYELNVTTNGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036008XLOC_036008Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057149TCONS_00057149Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 239..451
e-value: 4.3E-41
score: 140.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 217..469
score: 16.665
NoneNo IPR availableGENE3D3.30.70.270coord: 228..459
e-value: 1.3E-19
score: 70.0
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 231..457
e-value: 2.35406E-42
score: 149.749
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 144..449

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057149-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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