TCONS_00056773-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056773-protein
Unique NameTCONS_00056773-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056773-protein ID=TCONS_00056773-protein|Name=TCONS_00056773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
ASSKSVGNLLDQSLANLKQSVEALRQSNQKLTADYQTLKNQVTFLRGLHG
KCAPCKSVKDSKYCDCTEIQPRQDCLEFYQAGYKINGIYRLHGHRFSVLN
TYCDQTTDNGGWTTFLRRTNGSVNFTRNWNDYKLGFGKLTGEFWFGNENV
HDLXKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035758XLOC_035758Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056773TCONS_00056773Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..41
NoneNo IPR availableGENE3D1.20.5.170coord: 14..49
e-value: 4.6E-5
score: 23.1
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 70..156
e-value: 1.9E-4
score: -79.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 73..155
e-value: 1.2E-25
score: 90.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 66..156
score: 27.02
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 68..154
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 66..156
e-value: 1.1E-29
score: 102.8

Blast
[Close]
BLAST of TCONS_00056773-protein vs. Swiss-Prot (Human)
Match: MFAP4 (Microfibril-associated glycoprotein 4 OS=Homo sapiens GN=MFAP4 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.918e-23
Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:   51 KCAPCKSVKDSKYCDCTEIQPRQDCLEFYQAGYKINGIYRLHGHRFSV-LNTYCDQTTDNGGWTTFLRRTNGSVNFTRNWNDYKLGFGKLTGEFWFGNENVHDL 153
             CAP  S       +   +Q   DC + Y  GY+ +G+Y ++    SV +  +CD TT+ G WT F +R NGSV+F R WNDYKLGFG+  GE+W G +N+H L
Sbjct:   17 PCAPQVSGIRGDALERFCLQQPLDCDDIYAQGYQSDGVYLIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGLQNMHLL 120
The following BLAST results are available for this feature:
BLAST of TCONS_00056773-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFAP47.918e-2343.27Microfibril-associated glycoprotein 4 OS=Homo sapi... [more]
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