TCONS_00056726-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056726-protein
Unique NameTCONS_00056726-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length673

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056726-protein ID=TCONS_00056726-protein|Name=TCONS_00056726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=673bp
MILEEPVKVAVWQALNSYCFNDAVFLAERLYAEVKNEELLYLLATTYHRS
SQTKRAYHHLKNNTFTSIHNRYLFAVICYQLDKLREAELALTGIYNPINP
KTPTAIASEFGSMAGMALQLLGNIYKKSESIPRAVAHYKQSLKCNPFLWH
SYECLCNLGEKVDPTDYFKRMDSGKISPLFQSGNTPFQLPQPQVSPLNPL
PQYDNTPSENQDPTKAVPLLTSTVIKTSTKGFTCQSIINKSTPDIEMPPP
SSIGRNARQRILRSQASPVTPSFGLLPETVSPIVDGGGGGTPMFITPPIS
SLSSKVPTKAPQKAPSKKTTIKCTSSQKPSNHSDVSTPSQSPRESDGGAL
HGLRRSSRLFGSASSSRDMKRTPKVKFDDNVKVGVTPGRKTKSRVSRPIT
TTPLTPTSQNIQVTTSCTTGGKHKQINTHKEIKDEKPTLPSPIQQSADGL
MKLLVDIGKAYSAMATYDCRKAIELLEQLPLHQLTTSCMLEKLAICYYES
GNNDMAEKAFGKVQELDPCYIDEGMAMFSSLLWLTRKEMRLSSLAQNLVD
HDKNSPVAWCAMANCFSLQKEHDQAIKYLERAIQLKPDLAYAYTLLGHEY
VFTDENERALSCFRSAIRYNERHYNAWYGIGMIYYKQEKYTLAEQHYQKA
LKIHPKHSVLLCNLAVVSKGIIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035742XLOC_035742Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056726TCONS_00056726Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR001440TPR_1
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 590..623
e-value: 0.12
score: 21.4
coord: 624..657
e-value: 7.4E-9
score: 45.4
coord: 115..148
e-value: 0.056
score: 22.6
coord: 556..589
e-value: 4.1E-7
score: 39.6
coord: 487..520
e-value: 14.0
score: 13.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 591..622
e-value: 0.035
score: 14.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 590..623
score: 10.001
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 115..148
score: 8.024
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 624..657
score: 13.187
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 556..589
score: 10.414
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 487..520
score: 7.729
NoneNo IPR availablePFAMPF12895ANAPC3coord: 20..91
e-value: 2.2E-15
score: 56.5
NoneNo IPR availableGENE3D1.10.150.200coord: 444..498
e-value: 0.068
score: 12.5
NoneNo IPR availableGENE3D1.10.287.1110coord: 576..592
e-value: 1.7E-4
score: 20.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..407
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 9..183
e-value: 2.8E-9
score: 35.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 593..633
e-value: 1.7E-8
score: 33.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 634..669
e-value: 1.6E-11
score: 43.6
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 499..575
e-value: 7.5E-14
score: 50.9
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 35..156
coord: 443..518
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 549..667
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 625..657
e-value: 1.2E-10
score: 40.7
coord: 557..588
e-value: 1.2E-8
score: 34.3
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 115..148
score: 7.745
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 487..657
score: 29.573

Blast
[Close]
BLAST of TCONS_00056726-protein vs. Swiss-Prot (Human)
Match: CDC27 (Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2)

HSP 1 Score: 441.039 bits (1133), Expect = 1.348e-144
Identity = 279/711 (39.24%), Postives = 397/711 (55.84%), Query Frame = 0 
Query:    2 ILEEPVKVAVWQALNSYCFNDAVFLAERLYAEVKNEELLYLLATTYHRSSQTKRAYHHLKNNTFTSIHNRYLFAVICYQLDKLREAELALTG-IYNPINPKTPTAIASEFGSMAGMALQLLGNIYKKSESIPRAVAHYKQSLKCNPFLWHSYECLCNLGEKVDPTDYFKRMDSGKISPLFQSGNTPFQLPQPQVSPLNPLPQYDNTPSENQDPTKAVPLLTSTVIKTSTKGFTCQSIINKSTPDIEMPPPSSIGRNARQRILRSQA-----------------SPVTPSFGLLP-ETVSPIVDGGGGGTPMFI-TPPISSLSSKVPTKAPQK---APSKKTTIKCTSSQKPSNHSDVSTPSQSPRESDGGALHGL----------------RRSSRLFGSASSS-RDMKRTPKVKFDDNVKVGVTPGRKTKSRVSRPITTTPLTPTSQNI-QVTTSCTTGGKHKQINTHKEIKDEKPTLPSPIQQSADGLMKLLVDIGKAYSAMATYDCRKAIELLEQLPLHQLTTSCMLEKLAICYYESGNNDMAEKAFGKVQELDPCYIDEGMAMFSSLLWLTRKEMRLSSLAQNLVDHDKNSPVAWCAMANCFSLQKEHDQAIKYLERAIQLKPDLAYAYTLLGHEYVFTDENERALSCFRSAIRYNERHYNAWYGIGMIYYKQEKYTLAEQHYQKALKIHPKHSVLLCNLAVVSKGI 671
            +L+EPV+ A+WQALN Y + DAVFLAERLYAEV +EE L+LLAT Y+RS +  +AY  LK ++ T+   +YL A  C  L KL E E  L+G ++N    K+   I +EFG  A   L LLG++Y K++ + +    Y++SL  NPFLW  +E LC +GEK DP   FK       S    +  T  Q+P   +S   P      TP +  +       L    +++S   ++  +  + S  D  +  P ++       IL  Q                  SP+TPSFG+LP ET SP   G G     +  TPP+  + S   T AP K   A   +T  K   SQ  S +S   TP  +  +S G                      RRSSRLF S SS+ ++  +  K+KF   +     P RKTKS+ ++   T P    S  I ++ +S  + GK   I    +  + +       + +A+GLM LL ++GK Y A+ +Y+C++AI +L  LP H   T  +L ++   Y+E      AE+ F +V+ ++  Y  EGM ++S+ LW  +K++ LS L+++L D DKNSP AWCA  NCFSLQ+EHD AIK+ +RAIQ+ P+ AYAYTLLGHE+V T+E ++AL+CFR+AIR N RHYNAWYG+GMIYYKQEK++LAE H+QKAL I+P+ SVLLC++ VV   +
Sbjct:    3 VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFN--KQKSHDDIVTEFGDSACFTLSLLGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTSLQNFSNCLPNSCTT-QVPNHSLSHRQPETVLTETPQDTIE-------LNRLNLESSNSKYSLNTDSSVSYIDSAVISPDTVPLGTGTSILSKQVQNKPKTGRSLLGGPAALSPLTPSFGILPLETPSP---GDGSYLQNYTNTPPVIDVPS---TGAPSKKSVARIGQTGTKSVFSQ--SGNSREVTPILAQTQSSGPQTSTTPQVLSPTITSPPNALPRRSSRLFTSDSSTTKENSKKLKMKFPPKI-----PNRKTKSKTNKGGITQPNINDSLEITKLDSSIISEGKISTITPQIQAFNLQ-------KAAAEGLMSLLREMGKGYLALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAYFELSEYMQAERIFSEVRRIEN-YRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHAL 682
The following BLAST results are available for this feature:
BLAST of TCONS_00056726-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC271.348e-14439.24Cell division cycle protein 27 homolog OS=Homo sap... [more]
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