TCONS_00055282-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055282-protein
Unique NameTCONS_00055282-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length241

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055282-protein ID=TCONS_00055282-protein|Name=TCONS_00055282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
IGVPTVYRSYKNKTSFYLDRTIKSLIKTLSKEDKRQVMILIILADSDKTK
KTFIYQKLKDQFPNEIRSGLIGIIGIPKRFYLPLHDLTPTFNDTSQRMYW
RSKQSLDYAFIFQYVQNLCNYYLQIEDDVLANEQYFDTIMEDMNRLNSAR
NKEPVIFKNEKETRPKYKPWIVSEYYKMGFIGRLIPAHYLPLFAGFIKVF
YNELPVDWGYTHMLGLMGEYKANHNPSLFKHIGKQSSSLGT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034825XLOC_034825Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055282TCONS_00055282Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006759Glyco_transf_54
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016758transferase activity, transferring hexosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006759Glycosyl transferase family 54PFAMPF04666Glyco_transf_54coord: 1..239
e-value: 1.9E-55
score: 187.6

Blast
[Close]
BLAST of TCONS_00055282-protein vs. Swiss-Prot (Human)
Match: MGT4A (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT4A PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.675e-40
Identity = 86/255 (33.73%), Postives = 133/255 (52.16%), Query Frame = 0 
Query:    1 IGVPTVYRSYKNKTSFYLDRTIKSLIKTLSKEDKRQVMILIILADSDKTKKTFIYQKLKDQFPNEIRSGLIGIIGIPKRFYLPLHDLTPTFNDTSQRMYWRSKQSLDYAFIFQYVQNLCNYYLQIEDDVLANEQYFDTIMEDMNRLNSARNKEPVIFKNEKETRPKYKPWIVSEYYKMGFIGRLIPAHYLPLFAGFIKVFYNELPVDWGYTHMLGLM---GEYKANH------------NPSLFKHIGKQSSSLG 240
            +G+PTV R  K+    YL  T+ SLI  L  E+K   +I++ + ++D      +   L+ +F  EI SGL+ +I  P+ +Y  L +L  TF D+ +R+ WR+KQ+LDY F+  Y Q    YY+Q+EDD++  + YF+TI     +L+S                   + W++ E+ ++GFIG++  A  L L   FI +FY E P+DW   H+L +     E  A H             PSLF+H+G  SS  G
Sbjct:  139 MGIPTVKREVKS----YLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSS-------------------EEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSG 370
The following BLAST results are available for this feature:
BLAST of TCONS_00055282-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGT4A3.675e-4033.73Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu... [more]
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