TCONS_00055247-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055247-protein
Unique NameTCONS_00055247-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length774

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055247-protein ID=TCONS_00055247-protein|Name=TCONS_00055247-protein|organism=Clytia hemisphaerica|type=polypeptide|length=774bp
MAEASTSSKRYCIILKCNPDTDITDEKQRSDKPFKSLRRNAVTGAIWILD
DARQRADNDGTVILTSVVSRSFCIETPRSNIKEITDQEYGFLEAVPHERR
IGVLENKLLPELLKIKIYDKITVALDVASDQESHRDCIVHYIGPLERNKG
TYFGVVFEDDIGDCDGSLGDKIYFVARSNHGKFITIDTIMSISRGKFQRM
SNLFASASLEDLTRPGKNPLRKRTKSQTHLLALAGTESSESTENSPVVSK
KEPIVDLIKMTSSPLLSKVGFSSLSETRKTDNVKMRLNYESARTAGHKNR
NSNSSSGLRGMNLKHLEAVASQSNRRETSPDSLNSSNPDSSNLMRNSKTT
LKTDNDKIELQHRESGARSLEDERPSANAASNSSSQSNNASSYPGCNNED
AESLSSDLHVDSRVVFFDDSGIPLHGTIKYIGTFDDVIQVGVELDARITE
SDGNFRDGKKVFDCPSNKGLLCRPEELIKEDLMEMQMNQGMGKIIVDTPF
YSAPEVDQNQNVVMVEKSDDDSSSARKKKERSKSSVGEEHFSCPICLDTV
EEAVETTCCHQIFCEKCIRKHREISCPKCRKQPFTIIVSHFVRKLVGNFY
MECTNDGCYHILTRSDMKYHKEKCAFEKIRCPNDGCKAKVIRSSLDEHLK
MCSYSLVKCRNKGCLLRVTRQDLVEHNRRCDYMEVTCSNEGCHVTMIRLK
LSRHLRESCRYMIASCPVPGCRYKSTGSTLGEHLSSEHYEMFMRHLDELK
ALYAKDQDAIFTVKWSSTLSGDKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034794XLOC_034794Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055247TCONS_00055247Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR000938CAP-Gly_domain
IPR001293Znf_TRAF
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0046872metal ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 543..579
e-value: 3.0E-5
score: 33.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 543..580
score: 12.032
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 543..581
e-value: 2.2725E-7
score: 47.4404
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 410..478
e-value: 0.0014
score: 25.0
coord: 117..190
e-value: 6.8E-6
score: 35.6
IPR000938CAP Gly-rich domainGENE3D2.30.30.190coord: 124..192
e-value: 8.0E-12
score: 44.2
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 423..476
e-value: 3.1E-10
score: 39.9
coord: 131..187
e-value: 2.4E-10
score: 40.2
IPR000938CAP Gly-rich domainGENE3D2.30.30.190coord: 406..492
e-value: 2.7E-12
score: 45.8
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 143..185
score: 9.652
IPR000938CAP Gly-rich domainSUPERFAMILY74924Cap-Gly domaincoord: 389..484
IPR000938CAP Gly-rich domainSUPERFAMILY74924Cap-Gly domaincoord: 116..194
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 620..676
e-value: 9.1E-11
score: 42.2
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 620..673
score: 11.562
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 676..730
score: 11.106
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 543..579
e-value: 1.4E-5
score: 24.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 517..586
e-value: 5.9E-10
score: 38.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 639..676
e-value: 5.8E-12
score: 45.1
coord: 593..638
e-value: 3.2E-12
score: 46.0
coord: 677..734
e-value: 3.0E-8
score: 33.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..404
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 537..585
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 602..657
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 656..732

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055247-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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