TCONS_00054953-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054953-protein
Unique NameTCONS_00054953-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054953-protein ID=TCONS_00054953-protein|Name=TCONS_00054953-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MAASRNTAAANTTESSVDPDSTAETSRGISSSTLGSSTSQDNSSMARSTS
TSAPFKRSKPPAKTAGKKKVSTAVKRIQRELTDITLDPPPNCSAGPKGDN
LYDWVGTILGPQGTVYQGGVFFLEITFPSDYPFKPPKVIFRTRIYHCNIN
SQGQICLDILKDNWSPAFTVSKVLLSVTALLTDCNPADPLVGNIAQQFLS
NREEHDTIAREWTRRYAT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034631XLOC_034631Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054953TCONS_00054953Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 75..218
e-value: 1.1E-68
score: 244.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 76..212
e-value: 4.3E-46
score: 155.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 75..207
score: 41.054
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 74..213
e-value: 5.36863E-68
score: 206.67
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 19..218
e-value: 2.6E-70
score: 236.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 62..217
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 145..160

Blast
[Close]
BLAST of TCONS_00054953-protein vs. Swiss-Prot (Human)
Match: UB2E2 (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 2.005e-94
Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 0 
Query:   30 SSSTLGSSTSQDNSSMARSTSTSAPFKRSKPPAKTAGK------KKVSTAVKRIQRELTDITLDPPPNCSAGPKGDNLYDWVGTILGPQGTVYQGGVFFLEITFPSDYPFKPPKVIFRTRIYHCNINSQGQICLDILKDNWSPAFTVSKVLLSVTALLTDCNPADPLVGNIAQQFLSNREEHDTIAREWTRRYAT 218
            S ST G S+  D     R +    P +    P K  GK       K+ST+ KRIQ+EL +ITLDPPPNCSAGPKGDN+Y+W  TILGP G+VY+GGVFFL+ITF  DYPFKPPKV FRTRIYHCNINSQG ICLDILKDNWSPA T+SKVLLS+ +LLTDCNPADPLVG+IA Q+++NR EHD +AR+WT+RYAT
Sbjct:   11 SPSTSGGSSDGDQ----RESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 201
The following BLAST results are available for this feature:
BLAST of TCONS_00054953-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2E22.005e-9466.15Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens... [more]
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