Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00054916-protein ID=TCONS_00054916-protein|Name=TCONS_00054916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1258bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00054916-protein vs. Swiss-Prot (Human)
Match: TARB1 (Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.992e-21 Identity = 108/418 (25.84%), Postives = 191/418 (45.69%), Query Frame = 0 Query: 841 DNLQKIINNHIRDGQTFWPIYKNCIQAILHKQLLCTNDDNIIEG-----IKESWDAVFELGERKMAVTSIAAEDFFSSWNEIIAAN---PSNISYLEKYIDVFIKIGTFGPLRQKKEKPFHSLFTFLEQ-CEEFDQLPGMKSFQQHDQQVRISFVDFILHLPKNNQSAK-FADSLIQALTDFDQRIVR--KCFYANSLIHRQKLRCWQAVLILLPKLPCEFDFAVLLPKLFTCCKADNQPSVKYLIEWVIVLILLTKSQLVDLLIQQFDVATEKKIFSVTYILSTLIQL---TKSISDDSFKYIVDKTVLKILPWAQCQHLTSRVHSHVLLELMSKRIESVGDEELIKKYHFLPHCFTLSEKNTAAVKHRKELARM---FYVSTFNAVTSYNLEILFHTFLKEHSVLGDEWIQPNCFT 1240 D KII++ FW K +Q + ++L I+G IKE + E+ K V + SW I++A+ ++S + Y ++ ++ FG + ++ ++ + TF+E + M++ ++ D VRI V F+ L +N S K F + L L D D+ + + K +Y NSL HR K R WQ +L+L P+L F ++ ++F +NQ S+KY IEW+I+LIL Q + F E S+ L+ L L T++I + K I+ + ++ +L W + + R+++ V L+ + + + EE + E A +K R+ F+ +TF+ + Y LE +F+ + ++ DEWI + FT Sbjct: 971 DMAWKIISSLSNTQLIFWANLKAFVQFVFDNKVLTIAAK--IKGQAYFKIKEIMYKIIEMSAIKTGVFNTLISYCCQSW--IVSASNVSQGSLSSAKNYSELILEACIFGTVFRRDQRLVQDVQTFIENLGHDCAANIVMENTKREDHYVRICAVKFLCLLDGSNMSHKLFIEDLAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNF-LNGIIDRIFQAGFTNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDIITQNIPEK--KLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTVCKVLSVEEFDALTPVIESSLHQVESMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYILPRLSGLIEDEWITIDKFT 1381 HSP 2 Score: 94.3597 bits (233), Expect = 2.545e-19 Identity = 65/231 (28.14%), Postives = 116/231 (50.22%), Query Frame = 0 Query: 236 FWKFLQDGLVCSDPLPRKRALFVIKYILDVISKQQSFTT---KSIEGHSLVFWESNKHENLWKIWKSVALVLETLEEKQVHVINPVLPTVDEILLASV---NG--MLHHSWLLAILEKAMAHESKLIQTWAVKYSLSLDINRFPLLAQSCHGFIFDKLFESLKNIFLYCTEEDTVIGDPPKLLSLLRKFFFSCFGVLDGKQCALFCSKIISKLSDSTFNQIALIYITMALS 458 FW+ +Q GL +D L RKRA ++++ ++V ++ + T + G SL +W K + L K W++ L++ETLE Q+HVI PVLP ++ + +V NG + H SW + I ++ E+K++ V + L L + + FI L ++L LY IG L L+KF + +L + + F K I K++ + + +++++ AL+ Sbjct: 265 FWRTVQAGLGQADALTRKRARYLLQRAVEVSAELGADCTCGPQEGNGPSLFWWSERKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEYAVSEENGCWLFHPSWHMCIYKRMFESENKILSKEGVIHFLELYETKILPFSPEFSEFIIGPLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIRKMTSRHWCAVPILFLSKALA 495 The following BLAST results are available for this feature:
BLAST of TCONS_00054916-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|