TCONS_00054794-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054794-protein
Unique NameTCONS_00054794-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length954

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054794-protein ID=TCONS_00054794-protein|Name=TCONS_00054794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=954bp
MQVGITILCSILASALGTGTTVGNMVYNLGVKTSSSLFAGTDEFVEIQLV
GDVRVGQWERYIGDYRDRFENNEYDQLRYETKNIGRLTGVNVRVVQDGSY
LDHWRLSHIDVGINASTYRAFFHRTFKNNKEVHHQKEIIARQCAAGYQQI
QFSRKVEICEDVDECQTTCRGPGEVCQNHPGEFSCSCRVGFTMIDGRCVD
IDECQENSHHCYDPNSKCKNTKGSFQCPCRNGYERVGKSKKCTDINECTS
KLNNAHNCQQICSNTDGSYKCSCRNGWRLSTDNTTCIDADDCAPGKNPCD
PKNSECFDLQGSYRCICKHGYKQIPNTQQCTPITCKAIRLPSLNVQVRPP
GCRVDGAMKKGEKCYFSCKQGYELAQYSAKSYSCSKSGYFELTEDAYEPR
CVPTLCPKISNLANGMVVPYTCTSSGMQHNGKCFFHCLNGYRLHGTKETT
CSNKQYDARYNANKPICVEIPEIQCPDDITIKLPADKEKEALGMSFTEAS
TNMDSYQTNPKGVDAAYEFGLGTHKVEYIARNKYGDVAKCSYNVEVVDKS
APVVEFCPQDVFHEVKTTGKVRITWPEPRFKDNIGIKKISKNLQNGGMHS
PSTFNVVYDAYDHAGNIATCIFQVHIDIKRCAFDQIEGGDQAISKACYQV
GPRSLCSMFCNPGKTFHFIPDNVMMKTSWFCAQGDWLQNNVKINRLPDCV
DSEANPSKGKCKEGYVNTYDIYSQQPACGKCPRGTRYEGGVCLPCSEHTY
QDQEGQLQCKKCPVGKGSIKLRNKDITECKDLCPPGTYSRSGFITSKGCQ
QCPKDTYNENYGAIECFKCPYTTMTEQPGSKKSEHCLAIKDKIFTIPGSQ
EAEIHIGGERQVGCVVNSAKNISVSWVLPSNVEIGPNSAIDSTARITPTP
GKKSCNQYIASLNLKNVSKTMAGDYTCVVHYDNQPKEMKSVIDVKVLDQP
LIPQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034516XLOC_034516Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054794TCONS_00054794Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006212Furin_repeat
IPR000436Sushi_SCR_CCP_dom
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR001024PLAT/LH2_dom
IPR003410HYR_dom
IPR013151Immunoglobulin
IPR013032EGF-like_CS
IPR018097EGF_Ca-bd_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR007110Ig-like_dom
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006212Furin-like repeatSMARTSM00261furin_3coord: 739..789
e-value: 8.3
score: 11.4
coord: 153..210
e-value: 0.52
score: 19.4
IPR000436Sushi/SCR/CCP domainSMARTSM00032CCP_2coord: 335..401
e-value: 5.0
score: 8.7
coord: 406..467
e-value: 8.7E-5
score: 31.9
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 406..468
e-value: 0.0018361
score: 36.2868
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 401..469
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 200..243
e-value: 2.4E-7
score: 40.4
coord: 161..199
e-value: 3.9E-8
score: 43.0
coord: 244..287
e-value: 7.1E-10
score: 48.8
coord: 288..331
e-value: 2.5E-6
score: 37.0
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 288..330
e-value: 1.0E-7
score: 31.9
coord: 244..286
e-value: 8.7E-9
score: 35.4
coord: 161..192
e-value: 2.2E-4
score: 21.3
coord: 200..242
e-value: 1.4E-10
score: 41.1
IPR000742EGF-like domainSMARTSM00181egf_5coord: 247..287
e-value: 1.0E-4
score: 31.7
coord: 203..243
e-value: 9.6
score: 15.1
coord: 164..199
e-value: 0.081
score: 22.0
coord: 291..331
e-value: 0.034
score: 23.3
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 161..199
score: 11.6
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 200..243
score: 9.224
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 288..331
score: 11.036
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 244..287
score: 6.753
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 734..779
e-value: 1.7E-8
score: 44.2
coord: 786..836
e-value: 5.1E-8
score: 42.6
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 738..779
e-value: 2.5E-7
score: 30.2
coord: 786..836
e-value: 2.0E-8
score: 33.8
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 849..947
e-value: 0.0054
score: 25.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 471..549
e-value: 3.2E-4
score: 20.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 839..954
e-value: 1.7E-7
score: 30.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 550..631
e-value: 0.0088
score: 16.1
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 27..130
e-value: 6.5E-5
score: 23.4
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 18..126
e-value: 1.6E-8
score: 33.9
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 25..141
score: 10.322
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 25..119
NoneNo IPR availableGENE3D2.10.70.10coord: 403..470
e-value: 3.6E-8
score: 33.2
NoneNo IPR availableGENE3D2.10.50.10coord: 805..838
e-value: 0.045
score: 13.3
coord: 752..782
e-value: 7.2E-6
score: 25.5
NoneNo IPR availableGENE3D2.10.25.10coord: 157..183
e-value: 3.8E-7
score: 29.6
coord: 203..226
e-value: 9.9E-9
score: 34.7
coord: 248..268
e-value: 2.1E-8
score: 33.6
NoneNo IPR availableGENE3D2.10.50.10coord: 783..804
e-value: 4.0E-6
score: 26.2
coord: 721..751
e-value: 0.016
score: 14.7
NoneNo IPR availableGENE3D2.10.25.10coord: 293..334
e-value: 2.2E-9
score: 36.9
NoneNo IPR availableGENE3D2.10.25.10coord: 269..292
e-value: 5.1E-12
score: 45.0
coord: 184..202
e-value: 3.2E-9
score: 36.0
coord: 127..156
e-value: 0.068
score: 12.6
NoneNo IPR availableGENE3D2.10.25.10coord: 227..247
e-value: 5.1E-10
score: 39.1
NoneNo IPR availableGENE3D2.10.70.10coord: 344..402
e-value: 4.7E-4
score: 20.1
NoneNo IPR availableCDDcd00054EGF_CAcoord: 288..321
e-value: 0.00107306
score: 36.8458
NoneNo IPR availableCDDcd00096Igcoord: 864..937
e-value: 0.0050943
score: 35.1575
NoneNo IPR availableCDDcd00054EGF_CAcoord: 200..234
e-value: 7.32316E-4
score: 37.6162
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 280..332
IPR003410HYR domainPFAMPF02494HYRcoord: 470..546
e-value: 6.5E-5
score: 23.1
coord: 547..626
e-value: 9.6E-11
score: 41.8
IPR003410HYR domainPROSITEPS50825HYRcoord: 547..628
score: 19.19
IPR013151ImmunoglobulinPFAMPF00047igcoord: 849..939
e-value: 1.8E-5
score: 24.7
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 227..242
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 315..330
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 271..286
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 185..198
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 288..315
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 244..271
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 262..273
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 218..229
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 306..317
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 176..187
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 841..943
score: 8.266
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 849..937
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 142..292

Blast
[Close]
BLAST of TCONS_00054794-protein vs. Swiss-Prot (Human)
Match: HMCN2 (Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 1.012e-29
Identity = 66/195 (33.85%), Postives = 99/195 (50.77%), Query Frame = 0 
Query:  143 CAAGYQQIQFSRKVEICEDVDECQTTCRGPGEVCQNHPGEFSCSCRVGFTMI--DGRCVDIDECQENSHHCYDPNSKCKNTKGSFQC--PCRNGYERVGKSKKCTDINECTSKLNNAHNCQQICSNTDGSYKCSCRNGWRLSTDNTTCIDADDCAPGKNPCDPKNSECFDLQGSYRCICKHGYKQIPNTQQCTPI 333
            C  G++      +   C D DEC          C N PG FSC+C  GF +   D  C D+DEC  ++H C +   +C N  GS++C   C  G+ RV     C D++EC   L++ H   Q+C NT G ++CSC  G+R+   +  C+D ++C      C     +C +LQGSYRC+C  G   + + + CT +
Sbjct: 4613 CPEGFE---LDSQGAFCVDRDECSGGPSPCSHACLNAPGRFSCTCPTGFALAWDDRNCRDVDECAWDAHLCRE-GQRCVNLLGSYRCLPDCGPGF-RVADGAGCEDVDECLEGLDDCHY-NQLCENTPGGHRCSCPRGYRMQGPSLPCLDVNECLQLPKAC---AYQCHNLQGSYRCLCPPGQTLLRDGKACTSL 4798

HSP 2 Score: 83.9593 bits (206), Expect = 3.277e-16
Identity = 58/203 (28.57%), Postives = 89/203 (43.84%), Query Frame = 0 
Query:  159 CEDVDECQTTCRGPGEVCQNHPGEFSCSCRVGFTMI-DGR-CVDIDECQEN-----------------------SHHCY---DPNSKCKNTKGSFQCPCRNGYERVGKSKKCTDINECTSKLNNAHNCQQICSNTDGSYKCSCRNGWRLSTDNTTCIDADDCAPGKNPCDPKNSECFDLQGSYRCI---CKHGYKQIPNTQQC 330
            C DV+EC    +     C N  G + C C  G T++ DG+ C  ++   +N                       S+H +    P     ++ G   CP   G+ R  ++  CTD++EC  +    + CQ  C NT+GSY+C C  G+RL      C D ++C      C P    CF+ +GSY+C+   C   Y+Q P+   C
Sbjct: 4754 CLDVNECLQLPKACAYQCHNLQGSYRCLCPPGQTLLRDGKACTSLERNGQNVTTVSHRGPLLPWLRPWASIPGTSYHAWVSLRPGPMALSSVGRAWCP--PGFIR--QNGVCTDLDECRVR----NLCQHACRNTEGSYQCLCPAGYRLLPSGKNCQDINECEEESIECGP-GQMCFNTRGSYQCVDTPCPATYRQGPSPGTC 4947
The following BLAST results are available for this feature:
BLAST of TCONS_00054794-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN21.012e-2933.85Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=3[more]
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