TCONS_00054746-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054746-protein
Unique Name	TCONS_00054746-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	177

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054746-protein ID=TCONS_00054746-protein|Name=TCONS_00054746-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
MCQIESSCFPDKVISYNTGLWGSWRSWEYCPKGTWVVKLQTNIESHQGDG
DDTALNAISLRCNNDVGTTITSGYTNWGTWRAESQKCINGFYGGMLKFES
HLGPDDDDTSTNAIRLICRDDNQWYESGEGGWGSWTQSTYCPAGYKIVGL
QTQIESDQGNGDDTSLNGVRLLCRYFG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034492	XLOC_034492	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054746	TCONS_00054746	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005515	VOMI

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005515	Vitelline membrane outer layer protein I (VOMI)	GENE3D	2.100.10.20		coord: 81..175 e-value: 2.9E-23 score: 82.4
IPR005515	Vitelline membrane outer layer protein I (VOMI)	PFAM	PF03762	VOMI	coord: 16..173 e-value: 1.7E-35 score: 122.5
IPR005515	Vitelline membrane outer layer protein I (VOMI)	SUPERFAMILY	51092	Vitelline membrane outer protein-I (VMO-I)	coord: 13..173

Blast

[Close]

BLAST of TCONS_00054746-protein vs. Swiss-Prot (Human)
Match: VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.187e-19
Identity = 62/165 (37.58%), Postives = 81/165 (49.09%), Query Frame = 0

Query:   19 GLWGSWRSWEYCPKGTWVVKLQTNIESHQG-DGDDTALNAISLRC--NNDVGTT--ITSGYTNWGTWRAESQKCINGFYGGMLKFESHLGPDD---DDTSTNAIRLICRDDNQWYESGE--GGWGSWTQSTYCPAGYKIVGLQTQIESDQGNGDDTSLNGVRLLC 173
            G WG W   E CP G +       +E  QG  GDDTALN I L C   N +G T  + S   +WG W +E   C  G Y  ++ F   +       D+T+ N +R  C D  +    G   G +G W  S +CP G    GLQT+I+  +G GDDT+LN  RL C
Sbjct:   42 GPWGDWAWPEMCPDGFFASGFSLKVEPPQGIPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEW-SEPLWCRGGAY--LVAFSLRVEAPTTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDW--SDHCPKG--ACGLQTKIQGPRGLGDDTALNDARLFC 199

The following BLAST results are available for this feature:

BLAST of TCONS_00054746-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054746-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VMO1	5.187e-19	37.58	Vitelline membrane outer layer protein 1 homolog O...	[more]

You are here

TCONS_00054746-protein (polypeptide) - C. hemisphaerica