TCONS_00054598-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054598-protein
Unique NameTCONS_00054598-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1181

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054598-protein ID=TCONS_00054598-protein|Name=TCONS_00054598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1181bp
XRATKYYIDHRSVKTFPPTYYLQKTSTSLFIELLNGVLSQRHGNHLILSG
YNPEDHLNLLGVGSQQFDKIIDLVNKDYYKNSVLLVHPEKSCVCVFVVID
DISKLKESLKALSNILKTIYFASFELFCTEYLSITGTLVFPDKDMKDLEH
LMHLNIPEKSETLFITKQEFQKCNFEQWIDNLFKTIRSDFNTIRSKDFRS
NIDLFHTLCGTLMTVMAQTTQFLPHVCENDTVQVKTILLNGEQIECITNP
AKHKLIKACFGSGKTVLLIEMIRSILKEEDPKNLIFFLSYDPFSALDGKI
RESFKLISKEEKVPDDHCLNLKAMSLTYALAGAEFPVSDVFNLSSTPKRN
IGDVLLHIKNKHPEKKVHFFVDEVPCEMFTSGYSKEFFKYLNVDFKDNTV
VFSLQSVEKKREIVQEGRTEKSSEIDIESTGMTLLKLTKTMRMSRTLHDL
KEILEKEIESTSYSIPLEMKKKEEEDNDKDIAKVIFDYEAEKSDELNIKA
GDIITGIRKQFDGWMEGEVNGKRGLFPENFVEVAPKEPTNFQSSANSEGA
PFNVNKNKSKQLKKKIVRVLYDYKPVEEDELALSVGDIVEVVEENDGGWW
KGRQYDQEGLFPSNYVEFIVDQSQESLESLNQVTFEVVSDYTANMSDELN
LKVGDIVSNVGKENDSWLEGEVNGKRGMFPGNVVTVKDSTHIQLIDDKPQ
EPSKNLNPVGFEEPKSSSLTYLHDPEKILKSTGDDGSYEVVKTLNTSVKF
VDADCGHDFPSEILPRLFYLDENFTFDSVDAITTLSLILHQCLESRNEEG
VALICNNIQEVRMTEAALLKSKTRKPVVFAPYLDIDVPLQKLKIDLVKNL
ENTDNVLISDYRTLRGLEVSHSIIIVDEEDIIGPNLLVEMITRTITDLDI
LVLPKMNKQSPPTTIQNAFQKFDKQKLIHKTIVKVTKVNETTTSVELQGN
DGEIEHLETLALTDEDRKRFDEIKKLTQDNEQLQESNRKLISNGNQSSLT
LNKWDGKIMRSVTLNDGATLSFDDVWEILREKKFKKFGEIFQQNPNIVNS
LRGLGGSTLLMRAVYGDRFDVFVHLMDYPQDFSLVDNDGRNVLHCVGCRY
GTDRYLEMFDQQTIKKLINGRDEYDDTPLHWAAWENNHDVIRWLLAKGAD
PELKDKDGRRPDEQRRCDGVTKEIFRSFLSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034407XLOC_034407Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054598TCONS_00054598Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 973..993
NoneNo IPR availablePRINTSPR00499P67PHOXcoord: 655..671
score: 39.71
coord: 521..540
score: 30.0
coord: 495..514
score: 32.5
coord: 635..655
score: 27.38
coord: 671..684
score: 46.43
NoneNo IPR availableGENE3D2.30.30.40coord: 566..617
e-value: 3.4E-23
score: 80.5
NoneNo IPR availableGENE3D2.30.30.40coord: 659..705
e-value: 8.4E-11
score: 40.8
coord: 506..565
e-value: 1.1E-15
score: 56.4
NoneNo IPR availableGENE3D2.30.30.40coord: 618..658
e-value: 3.2E-14
score: 52.0
coord: 71..505
e-value: 9.9E-12
score: 44.0
NoneNo IPR availableCDDcd00204ANKcoord: 1056..1161
e-value: 2.35601E-17
score: 79.3498
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 579..594
score: 32.2
coord: 596..605
score: 38.17
coord: 607..619
score: 49.06
coord: 565..575
score: 36.01
IPR001452SH3 domainSMARTSM00326SH3_2coord: 565..620
e-value: 4.2E-22
score: 89.4
coord: 480..535
e-value: 7.3E-19
score: 78.7
coord: 633..688
e-value: 3.7E-14
score: 63.0
IPR001452SH3 domainPFAMPF14604SH3_9coord: 484..532
e-value: 6.3E-14
score: 51.5
IPR001452SH3 domainPFAMPF00018SH3_1coord: 568..613
e-value: 2.4E-15
score: 55.7
coord: 639..680
e-value: 2.8E-11
score: 42.8
IPR001452SH3 domainPROSITEPS50002SH3coord: 562..621
score: 18.28
IPR001452SH3 domainPROSITEPS50002SH3coord: 477..536
score: 14.596
IPR001452SH3 domainPROSITEPS50002SH3coord: 630..689
score: 12.565
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 631..691
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 564..624
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 480..543
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1124..1153
e-value: 1.7E-6
score: 37.6
coord: 1055..1084
e-value: 160.0
score: 11.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1124..1156
score: 12.77
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 915..1161
e-value: 5.1E-21
score: 74.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1060..1155
e-value: 1.4E-9
score: 38.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1055..1161
score: 16.918
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 1044..1161

Blast
[Close]
BLAST of TCONS_00054598-protein vs. Swiss-Prot (Human)
Match: SH3K1 (SH3 domain-containing kinase-binding protein 1 OS=Homo sapiens GN=SH3KBP1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.550e-27
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 0 
Query:  482 AKVIFDYEAEKSDELNIKAGDIITGIRKQFDGWMEGEVNGKRGLFPENFVE-------------VAPKEPTNFQSSANSEGAPFNV-NKNKSKQLKKKIVRVLYDYKPVEEDELALSVGDIVEVVEENDGGWWKGRQYDQEGLFPSNYVEFIVDQSQE 625
            A V FDY+A+  DEL I  G+IIT IRK+  GW EG++NG+RGLFP+NFV               AP++P +   S NS  +   +   NK  + +++  +V + Y P  +DEL L VGDI+EVV E + GWW+G    + G+FPSN+++ +  +S E
Sbjct:    4 AIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIKKEMKKDPLTNKAPEKPLHEVPSGNSLLSSETILRTNKRGERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDE 161
The following BLAST results are available for this feature:
BLAST of TCONS_00054598-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SH3K13.550e-2741.14SH3 domain-containing kinase-binding protein 1 OS=... [more]
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