TCONS_00054349-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054349-protein
Unique NameTCONS_00054349-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length535

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054349-protein ID=TCONS_00054349-protein|Name=TCONS_00054349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
VSNLIYYYTRKIKTKLASKMDPMFMAMSYFRRRKFDECIEICTKILLKNP
YDQGAWLLKTRAYTEQVYVDEVEVDEEGIAEMLMDDTSIAQVARPGTSLK
KPATSSGQAQAMRPMSNAGRPLSGFVRPGTQGGRPGTMEQAIKAPRTAST
ARPVTSASGRFVRLGTASMLSQPDGPFINLSKINFSKYAQRPNLSKALFE
YIFLHENDVRNALQLAAEATAAADFKDWWWKVQLAKCYYRLGLYRDAEKQ
LKSALRDEDIVDTYLYLCKVYVKLDQPLTAIEVYTKGLEKFPKETTLLTG
IARIYEMLNDMTNAVKYYKQVLESDNTHVEAISCIATNHFYSDQPEVALK
FFRRLLQMGVYNAEIYNNLGLCCFYAQQYDMALNCFTRALSLASDDNMXA
LNCFTRALSLASDDNMADIWYNISHVAIDIGDTKLAYQCLRLTLAADNDH
AEAYNNLGVLELRKTSLDGARSYFQQSMKLAPGMYEPHYNLAHISDKIGD
IQTSYNSIKKSLENFPDHAEGKTLLKDLQAKLAAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034269XLOC_034269Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054349TCONS_00054349Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR001440TPR_1
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 485..518
e-value: 1.6
score: 17.8
coord: 363..396
e-value: 2.7E-7
score: 40.2
coord: 417..450
e-value: 22.0
score: 12.0
coord: 261..294
e-value: 21.0
score: 12.1
coord: 228..260
e-value: 280.0
score: 2.2
coord: 451..484
e-value: 0.074
score: 22.2
coord: 23..52
e-value: 160.0
score: 4.4
coord: 295..328
e-value: 0.052
score: 22.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 417..448
e-value: 0.14
score: 12.3
coord: 451..482
e-value: 0.11
score: 12.7
coord: 299..327
e-value: 0.0016
score: 18.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 363..396
score: 10.443
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 261..294
score: 7.346
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 295..328
score: 8.29
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 329..362
score: 5.369
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 451..484
score: 9.676
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 417..450
score: 6.372
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 485..518
score: 6.343
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 473..534
e-value: 3.7E-8
score: 32.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 245..323
e-value: 2.6E-18
score: 65.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 397..472
e-value: 5.3E-15
score: 54.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 22..244
e-value: 1.2E-11
score: 44.0
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 324..396
e-value: 5.1E-16
score: 58.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 229..394
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 363..395
e-value: 1.3E-8
score: 34.2
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 261..518
score: 34.154
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 335..521

Blast
[Close]
BLAST of TCONS_00054349-protein vs. Swiss-Prot (Human)
Match: TTC8 (Tetratricopeptide repeat protein 8 OS=Homo sapiens GN=TTC8 PE=1 SV=2)

HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 323/558 (57.89%), Postives = 418/558 (74.91%), Query Frame = 0 
Query:   16 LASKMDPMFMAMSYFRRRKFDECIEICTKILLKNPYDQ----------GAWLLKTRAYTEQVYVDEVEVDEEGIAEMLMDDTSIAQVARPGTSLKKPAT--SSGQAQAMRPMSNAGRPLSGFVRPGTQGGRPGTMEQAIKAPRTASTARPVTSASGRFVRLGTASMLSQPDGPFINLSKINFSKYAQRPNLSKALFEYIFLHENDVR--------------------------NALQLAAEATAAADFKDWWWKVQLAKCYYRLGLYRDAEKQLKSALRDEDIVDTYLYLCKVYVKLDQPLTAIEVYTKGLEKFPKETTLLTGIARIYEMLNDMTNAVKYYKQVLESDNTHVEAISCIATNHFYSDQPEVALKFFRRLLQMGVYNAEIYNNLGLCCFYAQQYDMALNCFTRALSLASDDNMXALNCFTRALSLASDDNMADIWYNISHVAIDIGDTKLAYQCLRLTLAADNDHAEAYNNLGVLELRKTSLDGARSYFQQSMKLAPGMYEPHYNLAHISDKIGDIQTSYNSIKKSLENFPDHAEGKTLLKDLQAKLAAI 535
            ++S+M+P+ +A SYFRRRKF  C ++CT++L K+PYDQ           AW+LK RA TE VY+DE++VD+EGIAEM++D+ +IAQV RPGTSLK P T  + G +QA+RP++ AGRP++GF+RP TQ GRPGTMEQAI+ PRTA TARP+TS+SGRFVRLGTASML+ PDGPFINLS++N +KY+Q+P L+KALFEYIF HENDV+                          NAL LAA +T  + +KDWWWKVQ+ KCYYRLG+YR+AEKQ KSAL+ +++VDT+LYL KVYV LDQP+TA+ ++ +GL+KFP E TLL GIARIYE +N+M++A +YYK+VL+ DNTHVEAI+CI +NHFYSDQPE+AL+F+RRLLQMG+YN +++NNLGLCCFYAQQYDM L  F RALSLA +                 ++  AD+WYN+ HVA+ IGDT LA+QC RL L  +N+HAEAYNNL VLE+RK  ++ AR+  Q +  LAP MYEPH+N A ISDKIGD+Q SY + +KS   FPDH + + L+K L+   A +
Sbjct:    1 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQEPDPELPVHQAAWILKARALTEMVYIDEIDVDQEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLTKYSQKPKLAKALFEYIFHHENDVKTIHLEDVVLHLGIYPFLLRNKNHIEKNALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAEN-----------------EEEAADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML 541
The following BLAST results are available for this feature:
BLAST of TCONS_00054349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC80.000e+057.89Tetratricopeptide repeat protein 8 OS=Homo sapiens... [more]
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