PL10 (polypeptide) - C. hemisphaerica

Overview
NamePL10
Unique NameTCONS_00053842-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length681

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053842-protein ID=TCONS_00053842-protein|Name=PL10|organism=Clytia hemisphaerica|type=polypeptide|length=681bp
MSHVVQNDVQGLGQQVASLDLNKAEGNHQQHHGHGGPKKYVPPHMRSSGG
GGPPRNNYNNYDNQRDYRGGQRQGGGGGGGYYQQQGGGYNNYRGGGGGYN
NYQQGGYQNNYNNRRGGGGGFQWHSERGAKWDGDTGNPEDWSKPLPRNER
LERELFSSNQSGINFDKYEDIPVETTGNDSPKSIDSFEEASLGEIMNFNI
ELAKYTKPTPVQKSSIPIVKGKRDLMACAQTGSGKTAAFLIPILSRIFEE
GPFENAGTIHSGTSRRKQFPIAIILAPTRELASQIYDESRKFTYRSHMRP
CVVYGGADVGTQMRDIDRGCHLLVGTPGRLVDMIQRGKIGLECVQFLCLD
EADRMLDMGFEPQIREIVEKCDMPVTGQRQTLMFSATFPKEIQMLARDFL
DNYIFLAVGRVGSTSENITQKVVWVEEHDKREFLLDLLNASGPDSLTLVF
VETKRGADALEHFLVSCPDNYRVSSIHGDRHQREREQALASFRSGNTPIL
VATAVAARGLDIPNVKHVINFDMPSDIEEYVHRIGRTGRVGHTGLSTSFF
NDKNRNISRDLIDILSDAKQEVPSWLESMGYQAQQHQAAKRAQKSRYGGG
GGGGFGGRDYRYGGGSRGGGSGGHAGHNNYMGQQQQMYGGGNHYSQQQPM
YNNYRGGGGGGSRGGGRGGSRSNNSDDWWDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033976XLOC_033976Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053842TCONS_00053842Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 204..421
e-value: 1.2E-60
score: 217.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 216..406
score: 30.057
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 458..541
e-value: 2.2E-33
score: 126.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 429..541
e-value: 5.1E-30
score: 104.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 417..580
score: 23.231
NoneNo IPR availableGENE3D3.40.50.300coord: 55..419
e-value: 5.3E-55
score: 185.9
NoneNo IPR availableGENE3D3.40.50.300coord: 420..578
e-value: 1.4E-47
score: 160.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..681
NoneNo IPR availableCDDcd00079HELICccoord: 417..549
e-value: 2.30666E-37
score: 135.058
NoneNo IPR availableCDDcd00268DEADccoord: 187..407
e-value: 7.28682E-95
score: 293.237
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 209..394
e-value: 1.7E-49
score: 167.8
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 185..213
score: 9.641
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 271..559

Blast
[Close]
BLAST of PL10 vs. Swiss-Prot (Human)
Match: DDX3X (ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3)

HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0
Identity = 373/621 (60.06%), Postives = 457/621 (73.59%), Query Frame = 0 
Query:    1 MSHVVQNDVQGLGQQVASLDLNKAEGNHQQHHGHGGPK-KYVPPHMR----SSGGGGPPRNNYNNYDNQRDYRG-GQRQGGGGGGGYYQQQGGGYNNYRGGGGGYNNYQQGGYQNNYNNRRGGGGGFQWHSERG--AKWDGDTGNPEDWSKPLPRNERLERELFSSNQSGINFDKYEDIPVETTGNDSPKSIDSFEEASLGEIMNFNIELAKYTKPTPVQKSSIPIVKGKRDLMACAQTGSGKTAAFLIPILSRIFEEGPFENAGTIHSG--TSRRKQFPIAIILAPTRELASQIYDESRKFTYRSHMRPCVVYGGADVGTQMRDIDRGCHLLVGTPGRLVDMIQRGKIGLECVQFLCLDEADRMLDMGFEPQIREIVEKCDMPVTGQRQTLMFSATFPKEIQMLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEHDKREFLLDLLNASGPDSLTLVFVETKRGADALEHFLVSCPDNYRVSSIHGDRHQREREQALASFRSGNTPILVATAVAARGLDIPNVKHVINFDMPSDIEEYVHRIGRTGRVGHTGLSTSFFNDKNRNISRDLIDILSDAKQEVPSWLESMGYQAQQHQAAKRAQKSRYGGGGGGGFGGRDYR 611
            MSHV   +  GL QQ A LDLN ++    Q  G    K +Y+PPH+R    + G      + +++  ++  Y   G R    G   ++  +G G    R    G ++Y   G + +    R G G F    ERG  ++W  D  + +DWSKPLP +ERLE+ELFS   +GINF+KY+DIPVE TGN+ P  I+SF +  +GEI+  NIEL +YT+PTPVQK +IPI+K KRDLMACAQTGSGKTAAFL+PILS+I+ +GP E    +       RRKQ+PI+++LAPTRELA QIY+E+RKF+YRS +RPCVVYGGAD+G Q+RD++RGCHLLV TPGRLVDM++RGKIGL+  ++L LDEADRMLDMGFEPQIR IVE+  MP  G R T+MFSATFPKEIQMLARDFLD YIFLAVGRVGSTSENITQKVVWVEE DKR FLLDLLNA+G DSLTLVFVETK+GAD+LE FL    + Y  +SIHGDR QR+RE+AL  FRSG +PILVATAVAARGLDI NVKHVINFD+PSDIEEYVHRIGRTGRVG+ GL+TSFFN++N NI++DL+D+L +AKQEVPSWLE+M Y   +H     ++         GGFG RDYR
Sbjct:    1 MSHVAVENALGLDQQFAGLDLNSSD---NQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRG-RFDDRGRSDYDGIGSRGD----RSGFGKF----ERGGNSRW-CDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH--EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY---EHHYKGSSRGRSKSSRFSGGFGARDYR 603
The following BLAST results are available for this feature:
BLAST of PL10 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDX3X0.000e+060.06ATP-dependent RNA helicase DDX3X OS=Homo sapiens G... [more]
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