TCONS_00053761-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053761-protein
Unique NameTCONS_00053761-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053761-protein ID=TCONS_00053761-protein|Name=TCONS_00053761-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MTDTKNECPICLDHISNKCTLKCSHNFCKSCIKKIINHPFKVKCPYCRQD
SKASDITLEDGENDEELFSIPHITNIIDGIYVQAHTLGLASYHFGTLSNP
YISYESPECDMWPDLEDGSRPGPKKYFDQHHYDSKTRTFTGIIDWTPTKW
QGEAMWKYRMIFSEDFMIVEEGEAKRYKEVNASQYMVWEFGEGKDLDYER
VMPGYFNDSDTDED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033923XLOC_033923Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053761TCONS_00053761Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 8..47
e-value: 9.5E-5
score: 31.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 8..48
score: 12.725
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 7..50
e-value: 2.69641E-10
score: 52.448
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 5..51
e-value: 2.5E-8
score: 33.5
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..52
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..185
e-value: 1.3E-16
score: 60.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 23..32

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053761-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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