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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00053461-protein ID=TCONS_00053461-protein|Name=TCONS_00053461-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MVTSPSFLLLVFLISFLGHAVQANISNCCRIGISDATKQIVLEKDQITCS
ISNADKFEEIQNKLNLQLNGATQKLLCKTIYKQCCISSVKSNFCTTGIEL
GQSNAICSGGKNDIGGGAAMECCDCCKVGEKAASKREDCDAVKFKNDLCT
HAYRKCCKDKEQEMPIQTTQTPQRKTCSDIVCDKASTVSCGETNDGPVCH
CKDGYFAGLDKITCHDMDECLANKTICSVGKCQNTMGSYECVCDVGFEMQ
DNKCVKSTDKECRKGFELKDGECVDINECVTGAENCHSDLMCLNVNGTFR
CIEPQNCHSKYQAIYSTITNKRYCEDIDECAIHGNQICRNPFTECINIVG
GYQCKQTRCQDGLKLLNGYCTDIDECIEQPGICGEKGRCINLSGSYSCIC
NEGYKPDPATKKCIDVNECRLKLHQCSYQCINTPGSYYCKCPTGYEARST
KACNDIDECATGGHDCSGSERCFNTYGSYRCIDESCPAPYYIRTGRKDRP
QGCQKHCYHIKSLKTRKLCQNKKSFIAIRRRLFEFQKQISVFTETVNGTR
IRKSEFRFRYWWTYSNKHHHVKVQIVKGNEDGYFAIERKEGAHEIFLFNK
YDIKGYNQFHLVMETEVTQQTISSTASWRYQYHFYISVSNHQFIRPPTTK
V Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0005509 |
calcium ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000742 | EGF-like domain | SMART | SM00181 | egf_5 | coord: 329..371
e-value: 14.0
score: 14.2
coord: 418..454
e-value: 0.029
score: 23.5
coord: 375..414
e-value: 0.011
score: 25.0
coord: 176..215
e-value: 80.0
score: 5.7
coord: 219..255
e-value: 4.0E-4
score: 29.7
coord: 458..504
e-value: 39.0
score: 9.3 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 415..454
score: 9.841 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 372..414
score: 12.325 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 216..255
score: 8.949 |
| IPR001881 | EGF-like calcium-binding domain | SMART | SM00179 | egfca_6 | coord: 372..414
e-value: 5.6E-10
score: 49.2
coord: 415..454
e-value: 7.7E-11
score: 52.0
coord: 455..504
e-value: 6.3E-5
score: 32.4
coord: 326..371
e-value: 9.5E-6
score: 35.1
coord: 275..325
e-value: 0.0022
score: 23.2
coord: 216..255
e-value: 2.9E-9
score: 46.8 |
| IPR001881 | EGF-like calcium-binding domain | PFAM | PF07645 | EGF_CA | coord: 415..453
e-value: 2.3E-9
score: 37.2
coord: 275..312
e-value: 4.7E-8
score: 33.0
coord: 326..364
e-value: 8.9E-7
score: 28.9
coord: 216..254
e-value: 8.0E-8
score: 32.3
coord: 372..413
e-value: 2.3E-11
score: 43.6
coord: 455..494
e-value: 2.9E-9
score: 36.9 |
| None | No IPR available | GENE3D | 2.40.155.10 | | coord: 397..416
e-value: 1.4E-11
score: 43.8 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 373..396
e-value: 5.8E-11
score: 41.8 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 327..353
e-value: 9.4E-6
score: 25.2
coord: 276..301
e-value: 1.1E-6
score: 28.1
coord: 458..504
e-value: 3.0E-9
score: 36.4 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 218..243
e-value: 8.6E-9
score: 34.9 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 354..372
e-value: 4.4E-6
score: 26.0
coord: 244..275
e-value: 4.0E-9
score: 35.7
coord: 438..457
e-value: 2.4E-13
score: 49.2
coord: 302..326
e-value: 1.9E-5
score: 23.9
coord: 188..217
e-value: 7.3E-5
score: 22.1 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 417..437
e-value: 4.0E-9
score: 35.7 |
| None | No IPR available | PRODOM | PD968187 | | coord: 125..526
e-value: 7.0E-5
score: 115.0 |
| None | No IPR available | CDD | cd00054 | EGF_CA | coord: 455..494
e-value: 0.00190715
score: 35.6902 |
| None | No IPR available | CDD | cd00054 | EGF_CA | coord: 372..404
e-value: 3.76937E-5
score: 40.6978 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 439..453 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 241..254 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 398..413 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 430..441 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 232..243 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 389..400 |
| IPR000020 | Anaphylatoxin/fibulin | PROSITE | PS01177 | ANAPHYLATOXIN_1 | coord: 125..157 |
| IPR000020 | Anaphylatoxin/fibulin | PROSITE | PS01178 | ANAPHYLATOXIN_2 | coord: 125..157
score: 8.534 |
| IPR018097 | EGF-like calcium-binding, conserved site | PROSITE | PS01187 | EGF_CA | coord: 275..301 |
| IPR018097 | EGF-like calcium-binding, conserved site | PROSITE | PS01187 | EGF_CA | coord: 455..481 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 359..505 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 170..315 |
Blast
BLAST of TCONS_00053461-protein vs. Swiss-Prot (Human)
Match: FBLN1 (Fibulin-1 OS=Homo sapiens GN=FBLN1 PE=1 SV=4) HSP 1 Score: 174.096 bits (440), Expect = 4.240e-46 Identity = 137/452 (30.31%), Postives = 203/452 (44.91%), Query Frame = 0
Query: 54 ADKFEEIQNKLNLQLNGATQKLLCKTIYKQCCISSVKSNFCTTGIELGQSNAICSGGKNDIGGGAAM---ECCDCCKVGEKAASKREDCDAVKFKNDLCTHAYRKCCKDKEQEMPIQTTQTPQRKTCSDIVCDKASTV-------------SCGETNDGPVCHCKDGYFAGLDKITCHDMDECLANKTICSVGK-CQNTMGSYECVCDVGFEMQDNKCVKSTDKECRKGFEL-KDGECVDINECVTGAENCHSDLMCLNVNGTFRCIEPQNCHSKYQAIYSTITNKRYCEDIDECAIHGNQICRNPFTECINIVGGYQCKQT--RCQDGLKL--LNGYCTDIDECIEQPGICGEKGRCINLSGSYSCICNEGYKPDPATKKCIDVNEC-RLKLHQCSYQCINTPGSYYCKCPTGYE-ARSTKACNDIDECATGGHDCSGSERCFNTYGSYRC 481
AD ++ + L AT+ C+ + +QCC S ++ C TGI L C+ D A CC CC +G A ++ + C+ C ++ CC ++ + + ++ ++ C +T D VC C GY D ++C D++EC+ C +G+ C NT+GS+ C D C G+EL +D C DI+EC +G NC D +C N G+FRC C S + I + N C DI+EC + + C T CIN G Y C++ C G L C D+DEC CG+ RC+N GS+ C C GY D ++ C+DVNEC R C ++C NT GSY C C G+ + ++C DI+EC++ S+ C N YGSY+C
Sbjct: 38 ADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRC---------------QRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGF--IQDALGN---CIDINEC-LSISAPCPIGHT-CINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSS----PCSQECANVYGSYQC 463
The following BLAST results are available for this feature:
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