TCONS_00052504-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052504-protein
Unique NameTCONS_00052504-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length657

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052504-protein ID=TCONS_00052504-protein|Name=TCONS_00052504-protein|organism=Clytia hemisphaerica|type=polypeptide|length=657bp
SAIVHRKKSMFKVRNHQASTGRDQRSQIFIFYIFTIISGYIQSISEIFLN
HQSEKKRETFEFEEKVIKERKMTSRPPTLFDALKKKDVEKVAKLVEEGAD
LNASGTHEESVLFKAIQLGDPQIFDILMSKTNGKKKKIDVNKKNPVTEFS
PLHHAVKHKNDHAVIELLKCAEIKVNERNKEGNTPLHLAIDNGNEEAVLH
LAFNDKTQYDVINNNNLTAVQVNTGDSNSTPARNFLIECMKQSKDQLIAG
TKLKCFSMETRQHLLRKAQDENLKGSSNVQFVTNIMQRVSVHNSTMKDLY
VSGSTVSESPGIVMPPETTSAAQSTGTQANPSSGYQTPNQPSHPQCSGRP
GTQPSSGSQXPSHPQSSGQPGTQPSSGSQTNHTPVVNLNNSTVGRGVHVA
KGDRNQTVYNYGGQTSHQQPSNNPDPVNRERPPHTEVPIDDHNPSTPPRS
QNTTEHPTGYHTTQPPHSAGYQSTQPRPQQHQSAKANTQPNQHPRTFAPP
DQRPQPTTDNPMQDTSSPRNYQSIYQTDNPSELDHKTPKITNAAMPDINR
LSINQMRQSTNTDSPSLSNNQQQTVHPFDDLTGSLPPTRTTTTTNTLPNM
GSLPTENTPRNSTDQLPSSSNVPNNQLGARDSSRAPSENTDTQATFRQKP
QDSFAGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033201XLOC_033201Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052504TCONS_00052504Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 181..210
e-value: 0.037
score: 23.2
coord: 74..103
e-value: 520.0
score: 7.1
coord: 147..177
e-value: 5.4
score: 16.0
coord: 107..140
e-value: 3300.0
score: 1.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 181..214
score: 10.312
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 112..204
e-value: 2.0E-10
score: 41.0
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 43..237
e-value: 5.0E-26
score: 90.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 74..238
score: 21.031
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 79..222
NoneNo IPR availableCDDcd00204ANKcoord: 79..201
e-value: 2.50025E-18
score: 80.8906

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052504-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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