TCONS_00052201-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052201-protein
Unique NameTCONS_00052201-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052201-protein ID=TCONS_00052201-protein|Name=TCONS_00052201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
LDIPRAPGLGLLLERVEYQQYNEKYGNDGLHNPLTWQDLELEVERFKIEC
IWQSIMEEEIKKSPMVIWLKTLANHTYSTVGMNQPQDTGYKGQKGVFPTN
VPNSNNKRGRGTYRGHKRPWESGPRGGGRGGRGGRGGWNNNNNRGGANK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033053XLOC_033053Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052201TCONS_00052201Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..149

Blast
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BLAST of TCONS_00052201-protein vs. Swiss-Prot (Human)
Match: TRUA (tRNA pseudouridine synthase A, mitochondrial OS=Homo sapiens GN=PUS1 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 9.474e-21
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 0 
Query:    1 LDIPRAPGLGLLLERVEYQQYNEKYGNDGLHNPLTWQDLELEVERFKIECIWQSIMEEEIKKSPMVIWLKTLANHTYSTVGMN 83
            +D+P+APGLGL+LERV +++YN+++GNDGLH PL W   E +V  FK E I+ +I+  E  +  M  WL TL  H +S   + 
Sbjct:  323 VDVPKAPGLGLVLERVHFEKYNQRFGNDGLHEPLDWAQEEGKVAAFKEEHIYPTIIGTERDERSMAQWLSTLPIHNFSATALT 405
The following BLAST results are available for this feature:
BLAST of TCONS_00052201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRUA9.474e-2145.78tRNA pseudouridine synthase A, mitochondrial OS=Ho... [more]
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